Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU300125 |
| length | 1180 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G253494 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 11712997 ~ 11714753 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU300045 | lncRNA | downstream | 92602 | 11613240 ~ 11620395 (-) | True | G253433 |
| TU300091 | lncRNA | downstream | 140978 | 11571820 ~ 11572019 (-) | True | G253464 |
| TU300090 | lncRNA | downstream | 141373 | 11571425 ~ 11571624 (-) | True | G253463 |
| TU300041 | lncRNA | downstream | 170518 | 11540181 ~ 11542479 (-) | True | G253430 |
| TU300042 | lncRNA | downstream | 170518 | 11540181 ~ 11542479 (-) | False | G253430 |
| TU300131 | lncRNA | upstream | 29774 | 11743950 ~ 11744158 (-) | True | G253499 |
| TU300120 | lncRNA | upstream | 41029 | 11755205 ~ 11757930 (-) | True | G253492 |
| TU300151 | lncRNA | upstream | 63542 | 11777718 ~ 11777933 (-) | True | G253509 |
| TU300144 | lncRNA | upstream | 126865 | 11841041 ~ 11859346 (-) | False | LOC113530816 |
| TU300190 | lncRNA | upstream | 190101 | 11904277 ~ 11904686 (-) | True | G253538 |
| XM_026921204.2 | mRNA | downstream | 114611 | 11587705 ~ 11598386 (-) | True | LOC113530846 |
| XM_026920457.2 | mRNA | downstream | 144394 | 11549394 ~ 11568603 (-) | False | avpr2ab |
| XM_026920456.2 | mRNA | downstream | 144395 | 11549394 ~ 11568602 (-) | True | avpr2ab |
| XM_034311705.1 | mRNA | downstream | 269069 | 11438049 ~ 11443928 (-) | False | emp3b |
| XM_034312010.1 | mRNA | upstream | 3653 | 11717829 ~ 11725337 (-) | False | LOC113530831 |
| XM_026921182.2 | mRNA | upstream | 3653 | 11717829 ~ 11725337 (-) | False | LOC113530831 |
| XM_026921183.2 | mRNA | upstream | 3653 | 11717829 ~ 11725337 (-) | True | LOC113530831 |
| XM_026920993.2 | mRNA | upstream | 14825 | 11729001 ~ 11741759 (-) | False | uba3 |
| XM_026920994.2 | mRNA | upstream | 14825 | 11729001 ~ 11741728 (-) | False | uba3 |
| TU300077 | other | downstream | 144467 | 11556887 ~ 11568530 (-) | False | avpr2ab |
| TU299993 | other | downstream | 250291 | 11456021 ~ 11462706 (-) | False | LOC113530309 |
| TU299994 | other | downstream | 250291 | 11456021 ~ 11462706 (-) | True | LOC113530309 |
| trnan-guu_24 | other | downstream | 439594 | 11273330 ~ 11273403 (-) | True | trnan-guu_24 |
| trnae-uuc_4 | other | downstream | 453883 | 11259043 ~ 11259114 (-) | True | trnae-uuc_4 |
| XR_003403206.1 | other | upstream | 178172 | 11892348 ~ 11892420 (-) | True | LOC113530992 |
| XR_003403207.1 | other | upstream | 178751 | 11892927 ~ 11893002 (-) | True | LOC113530993 |
| trnae-cuc_33 | other | upstream | 426926 | 12141102 ~ 12141173 (-) | True | trnae-cuc_33 |
| TU300417 | other | upstream | 444596 | 12158772 ~ 12159360 (-) | False | ptk6b |
| XR_004579685.1 | other | upstream | 2415040 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
