Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU300430 |
| length | 234 |
| lncRNA type | intronic |
| GC content | 0.56 |
| exon number | 2 |
| gene id | G253749 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 12217424 ~ 12217744 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403159.2 | lncRNA | downstream | 66479 | 12143633 ~ 12150945 (-) | True | LOC113530483 |
| TU300415 | lncRNA | downstream | 66563 | 12143714 ~ 12150861 (-) | False | LOC113530483 |
| TU300190 | lncRNA | downstream | 312738 | 11904277 ~ 11904686 (-) | True | G253538 |
| TU300144 | lncRNA | downstream | 358078 | 11841041 ~ 11859346 (-) | False | LOC113530816 |
| TU300151 | lncRNA | downstream | 439491 | 11777718 ~ 11777933 (-) | True | G253509 |
| TU300547 | lncRNA | upstream | 174619 | 12392363 ~ 12393653 (-) | True | G253843 |
| XR_003403193.2 | lncRNA | upstream | 388797 | 12606541 ~ 12607682 (-) | True | LOC113530910 |
| TU300710 | lncRNA | upstream | 443500 | 12661244 ~ 12709317 (-) | True | G253977 |
| XR_004579658.1 | lncRNA | upstream | 474601 | 12692345 ~ 12714075 (-) | True | LOC117599211 |
| TU300707 | lncRNA | upstream | 475875 | 12693619 ~ 12714080 (-) | False | LOC117599211 |
| XM_026920536.2 | mRNA | downstream | 31646 | 12168527 ~ 12185778 (-) | True | zgc:194282 |
| XM_026920538.2 | mRNA | downstream | 49629 | 12155728 ~ 12167795 (-) | False | ptk6b |
| XM_026920537.2 | mRNA | downstream | 49632 | 12155728 ~ 12167792 (-) | True | ptk6b |
| XM_026920760.2 | mRNA | downstream | 129703 | 12083985 ~ 12087721 (-) | True | gid8b |
| XM_026920758.2 | mRNA | downstream | 133891 | 12068589 ~ 12083533 (-) | True | slc17a9b |
| XM_026920136.2 | mRNA | upstream | 88409 | 12306153 ~ 12316352 (-) | True | commd7 |
| XM_034311983.1 | mRNA | upstream | 177700 | 12395444 ~ 12400748 (-) | True | ube2t |
| XM_034311984.1 | mRNA | upstream | 177763 | 12395507 ~ 12400748 (-) | False | ube2t |
| XM_026921387.2 | mRNA | upstream | 183721 | 12401465 ~ 12406721 (-) | False | zgc:194242 |
| XM_026921388.2 | mRNA | upstream | 183721 | 12401465 ~ 12406721 (-) | True | zgc:194242 |
| TU300417 | other | downstream | 58064 | 12158772 ~ 12159360 (-) | False | ptk6b |
| trnae-cuc_33 | other | downstream | 76251 | 12141102 ~ 12141173 (-) | True | trnae-cuc_33 |
| XR_003403207.1 | other | downstream | 324422 | 11892927 ~ 11893002 (-) | True | LOC113530993 |
| XR_003403206.1 | other | downstream | 325004 | 11892348 ~ 11892420 (-) | True | LOC113530992 |
| TU300077 | other | downstream | 648894 | 11556887 ~ 11568530 (-) | False | avpr2ab |
| XR_004579685.1 | other | upstream | 1911472 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
| XR_004579686.1 | other | upstream | 1911472 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
| XR_004579684.1 | other | upstream | 1911472 | 14129216 ~ 14150581 (-) | True | LOC113530423 |
| XR_004579687.1 | other | upstream | 1911472 | 14129216 ~ 14146831 (-) | False | LOC113530423 |
| TU301948 | other | upstream | 2481528 | 14699272 ~ 14704270 (-) | False | G255071 |
