Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU300797 |
| length | 220 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G254052 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 12808380 ~ 12808599 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU300707 | lncRNA | downstream | 94300 | 12693619 ~ 12714080 (-) | False | LOC117599211 |
| XR_004579658.1 | lncRNA | downstream | 94305 | 12692345 ~ 12714075 (-) | True | LOC117599211 |
| TU300710 | lncRNA | downstream | 99063 | 12661244 ~ 12709317 (-) | True | G253977 |
| XR_003403193.2 | lncRNA | downstream | 200698 | 12606541 ~ 12607682 (-) | True | LOC113530910 |
| TU300547 | lncRNA | downstream | 414727 | 12392363 ~ 12393653 (-) | True | G253843 |
| TU300820 | lncRNA | upstream | 88885 | 12897484 ~ 12898568 (-) | False | plagl2 |
| TU300819 | lncRNA | upstream | 88943 | 12897542 ~ 12902277 (-) | False | plagl2 |
| TU300848 | lncRNA | upstream | 115120 | 12923719 ~ 12924012 (-) | True | G254101 |
| TU300856 | lncRNA | upstream | 123620 | 12932219 ~ 12932420 (-) | True | G254109 |
| TU300857 | lncRNA | upstream | 124126 | 12932725 ~ 12933139 (-) | True | G254110 |
| XM_026921372.2 | mRNA | downstream | 153559 | 12615024 ~ 12654821 (-) | False | slco4a1 |
| XM_026921371.2 | mRNA | downstream | 153559 | 12615024 ~ 12654821 (-) | True | slco4a1 |
| XM_034312213.1 | mRNA | downstream | 154520 | 12615024 ~ 12653860 (-) | False | slco4a1 |
| XM_026921119.2 | mRNA | downstream | 235872 | 12545673 ~ 12572508 (-) | False | ntsr1 |
| XM_026920426.2 | mRNA | upstream | 88875 | 12897474 ~ 12934308 (-) | True | plagl2 |
| XM_026920427.2 | mRNA | upstream | 88875 | 12897474 ~ 12904007 (-) | False | plagl2 |
| XM_026921111.2 | mRNA | upstream | 166845 | 12975444 ~ 12987137 (-) | True | LOC113530792 |
| XM_034312114.1 | mRNA | upstream | 186821 | 12995420 ~ 13028887 (-) | False | myt1b |
| XM_034312115.1 | mRNA | upstream | 186821 | 12995420 ~ 13028887 (-) | False | myt1b |
| TU300417 | other | downstream | 649020 | 12158772 ~ 12159360 (-) | False | ptk6b |
| trnae-cuc_33 | other | downstream | 667207 | 12141102 ~ 12141173 (-) | True | trnae-cuc_33 |
| XR_003403207.1 | other | downstream | 915378 | 11892927 ~ 11893002 (-) | True | LOC113530993 |
| XR_003403206.1 | other | downstream | 915960 | 11892348 ~ 11892420 (-) | True | LOC113530992 |
| TU300077 | other | downstream | 1239850 | 11556887 ~ 11568530 (-) | False | avpr2ab |
| XR_004579685.1 | other | upstream | 1320617 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
| XR_004579686.1 | other | upstream | 1320617 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
| XR_004579684.1 | other | upstream | 1320617 | 14129216 ~ 14150581 (-) | True | LOC113530423 |
| XR_004579687.1 | other | upstream | 1320617 | 14129216 ~ 14146831 (-) | False | LOC113530423 |
| TU301948 | other | upstream | 1890673 | 14699272 ~ 14704270 (-) | False | G255071 |
