Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU300928 |
| length | 214 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 1 |
| gene id | oprl1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 13251140 ~ 13283885 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403150.2 | lncRNA | downstream | 48509 | 13201019 ~ 13202631 (-) | True | LOC113530405 |
| TU300905 | lncRNA | downstream | 109921 | 13141011 ~ 13141219 (-) | True | G254153 |
| TU300854 | lncRNA | downstream | 281129 | 12968364 ~ 12970011 (-) | True | G254107 |
| TU300857 | lncRNA | downstream | 318001 | 12932725 ~ 12933139 (-) | True | G254110 |
| TU300856 | lncRNA | downstream | 318720 | 12932219 ~ 12932420 (-) | True | G254109 |
| TU301036 | lncRNA | upstream | 176937 | 13428290 ~ 13488493 (-) | True | G254270 |
| XR_004579752.1 | lncRNA | upstream | 212838 | 13464191 ~ 13465215 (-) | True | LOC117599295 |
| TU301365 | lncRNA | upstream | 339147 | 13590500 ~ 13590970 (-) | True | G254568 |
| TU301384 | lncRNA | upstream | 363075 | 13614428 ~ 13614663 (-) | True | G254587 |
| TU301397 | lncRNA | upstream | 413540 | 13664893 ~ 13665473 (-) | True | G254599 |
| XM_034312114.1 | mRNA | downstream | 222253 | 12995420 ~ 13028887 (-) | False | myt1b |
| XM_034312115.1 | mRNA | downstream | 222253 | 12995420 ~ 13028887 (-) | False | myt1b |
| XM_034312112.1 | mRNA | downstream | 222253 | 12995420 ~ 13028887 (-) | False | myt1b |
| XM_034312111.1 | mRNA | downstream | 222253 | 12995420 ~ 13028887 (-) | False | myt1b |
| XM_026921362.2 | mRNA | downstream | 226135 | 12995420 ~ 13025005 (-) | True | myt1b |
| XM_026921347.2 | mRNA | upstream | 189431 | 13440784 ~ 13451374 (-) | True | tcea2 |
| XM_026920173.2 | mRNA | upstream | 374545 | 13625898 ~ 13632021 (-) | False | sla2 |
| XM_026920172.2 | mRNA | upstream | 374545 | 13625898 ~ 13632021 (-) | True | sla2 |
| XM_026920609.2 | mRNA | upstream | 384459 | 13635812 ~ 13699042 (-) | False | ndrg3b |
| XM_026920605.2 | mRNA | upstream | 384459 | 13635812 ~ 13699042 (-) | False | ndrg3b |
| TU300417 | other | downstream | 1091780 | 12158772 ~ 12159360 (-) | False | ptk6b |
| trnae-cuc_33 | other | downstream | 1109967 | 12141102 ~ 12141173 (-) | True | trnae-cuc_33 |
| XR_003403207.1 | other | downstream | 1358138 | 11892927 ~ 11893002 (-) | True | LOC113530993 |
| XR_003403206.1 | other | downstream | 1358720 | 11892348 ~ 11892420 (-) | True | LOC113530992 |
| TU300077 | other | downstream | 1682610 | 11556887 ~ 11568530 (-) | False | avpr2ab |
| XR_004579685.1 | other | upstream | 877863 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
| XR_004579686.1 | other | upstream | 877863 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
| XR_004579684.1 | other | upstream | 877863 | 14129216 ~ 14150581 (-) | True | LOC113530423 |
| XR_004579687.1 | other | upstream | 877863 | 14129216 ~ 14146831 (-) | False | LOC113530423 |
| TU301948 | other | upstream | 1447919 | 14699272 ~ 14704270 (-) | False | G255071 |
