Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU301397 |
| length | 547 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G254599 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 13664893 ~ 13665473 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU301384 | lncRNA | downstream | 50230 | 13614428 ~ 13614663 (-) | True | G254587 |
| TU301365 | lncRNA | downstream | 73923 | 13590500 ~ 13590970 (-) | True | G254568 |
| TU301036 | lncRNA | downstream | 176400 | 13428290 ~ 13488493 (-) | True | G254270 |
| XR_004579752.1 | lncRNA | downstream | 199678 | 13464191 ~ 13465215 (-) | True | LOC117599295 |
| TU300928 | lncRNA | downstream | 413540 | 13251140 ~ 13251353 (-) | False | oprl1 |
| TU301398 | lncRNA | upstream | 27324 | 13692797 ~ 13696620 (-) | True | G254600 |
| TU301364 | lncRNA | upstream | 34536 | 13700009 ~ 13700405 (-) | True | G254567 |
| TU301888 | lncRNA | upstream | 865352 | 14530825 ~ 14532588 (-) | True | G255020 |
| TU301946 | lncRNA | upstream | 1034751 | 14700224 ~ 14704270 (-) | False | G255071 |
| TU301947 | lncRNA | upstream | 1034751 | 14700224 ~ 14704270 (-) | True | G255071 |
| XM_026920608.2 | mRNA | downstream | 8219 | 13635812 ~ 13656674 (-) | True | ndrg3b |
| XM_026920610.2 | mRNA | downstream | 8220 | 13635812 ~ 13656673 (-) | False | ndrg3b |
| XM_026920173.2 | mRNA | downstream | 32872 | 13625898 ~ 13632021 (-) | False | sla2 |
| XM_026920172.2 | mRNA | downstream | 32872 | 13625898 ~ 13632021 (-) | True | sla2 |
| XM_026921347.2 | mRNA | downstream | 213519 | 13440784 ~ 13451374 (-) | True | tcea2 |
| XM_026921355.2 | mRNA | upstream | 34963 | 13700436 ~ 13721730 (-) | False | phf20b |
| XM_026921354.2 | mRNA | upstream | 34963 | 13700436 ~ 13721730 (-) | False | phf20b |
| XM_026921353.2 | mRNA | upstream | 34963 | 13700436 ~ 13721730 (-) | False | phf20b |
| XM_026921352.2 | mRNA | upstream | 34963 | 13700436 ~ 13721730 (-) | True | phf20b |
| XM_034311623.1 | mRNA | upstream | 34963 | 13700436 ~ 13718547 (-) | False | phf20b |
| TU300417 | other | downstream | 1505533 | 12158772 ~ 12159360 (-) | False | ptk6b |
| trnae-cuc_33 | other | downstream | 1523720 | 12141102 ~ 12141173 (-) | True | trnae-cuc_33 |
| XR_003403207.1 | other | downstream | 1771891 | 11892927 ~ 11893002 (-) | True | LOC113530993 |
| XR_003403206.1 | other | downstream | 1772473 | 11892348 ~ 11892420 (-) | True | LOC113530992 |
| TU300077 | other | downstream | 2096363 | 11556887 ~ 11568530 (-) | False | avpr2ab |
| XR_004579685.1 | other | upstream | 463743 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
| XR_004579686.1 | other | upstream | 463743 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
| XR_004579684.1 | other | upstream | 463743 | 14129216 ~ 14150581 (-) | True | LOC113530423 |
| XR_004579687.1 | other | upstream | 463743 | 14129216 ~ 14146831 (-) | False | LOC113530423 |
| TU301948 | other | upstream | 1033799 | 14699272 ~ 14704270 (-) | False | G255071 |
