Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU302361 |
| length | 326 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G255435 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 15332126 ~ 15332451 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU302326 | lncRNA | downstream | 72021 | 15258485 ~ 15260105 (-) | False | LOC113530775 |
| TU302304 | lncRNA | downstream | 104166 | 15182157 ~ 15227960 (-) | False | G255385 |
| TU302303 | lncRNA | downstream | 146154 | 15182157 ~ 15185972 (-) | True | G255385 |
| TU302322 | lncRNA | downstream | 151486 | 15180386 ~ 15180640 (-) | True | G255403 |
| TU302215 | lncRNA | downstream | 453620 | 14875644 ~ 14878506 (-) | True | G255306 |
| TU302438 | lncRNA | upstream | 121682 | 15454133 ~ 15454354 (-) | True | G255506 |
| TU302664 | lncRNA | upstream | 320396 | 15652847 ~ 15657703 (-) | True | G255693 |
| TU302681 | lncRNA | upstream | 411289 | 15743740 ~ 15820154 (-) | False | znf512b |
| TU302675 | lncRNA | upstream | 475252 | 15807703 ~ 15820154 (-) | False | znf512b |
| TU302753 | lncRNA | upstream | 511140 | 15843591 ~ 15849718 (-) | True | G255772 |
| XM_026921090.2 | mRNA | downstream | 14761 | 15259585 ~ 15317365 (-) | False | LOC113530775 |
| XM_026921088.2 | mRNA | downstream | 14761 | 15259585 ~ 15317365 (-) | False | LOC113530775 |
| XM_026921087.2 | mRNA | downstream | 14761 | 15259585 ~ 15317365 (-) | False | LOC113530775 |
| XM_034312166.1 | mRNA | downstream | 14761 | 15259585 ~ 15317365 (-) | True | LOC113530775 |
| XM_026920086.2 | mRNA | downstream | 74375 | 15187398 ~ 15257751 (-) | False | si:rp71-79p20.2 |
| XM_026921243.2 | mRNA | upstream | 7545 | 15339996 ~ 15357857 (-) | True | birc7 |
| XM_026921257.2 | mRNA | upstream | 79719 | 15412170 ~ 15451350 (-) | False | lmod3 |
| XM_026921256.2 | mRNA | upstream | 79719 | 15412170 ~ 15451350 (-) | False | lmod3 |
| XM_034312173.1 | mRNA | upstream | 80367 | 15412818 ~ 15451350 (-) | False | lmod3 |
| XM_026921258.2 | mRNA | upstream | 93061 | 15425512 ~ 15451350 (-) | False | lmod3 |
| TU301948 | other | downstream | 627856 | 14699272 ~ 14704270 (-) | False | G255071 |
| XR_004579685.1 | other | downstream | 1181545 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
| XR_003403204.1 | other | upstream | 155306 | 15487757 ~ 15487859 (-) | True | LOC113530990 |
| TU302676 | other | upstream | 382584 | 15715035 ~ 15820154 (-) | False | znf512b |
| XR_003403156.2 | other | upstream | 1315372 | 16647823 ~ 16695030 (-) | False | fam50a |
| XR_004579669.1 | other | upstream | 1480933 | 16813384 ~ 16831259 (-) | False | si:ch211-210c8.6 |
| XR_004579680.1 | other | upstream | 2344114 | 17676565 ~ 17695598 (-) | True | LOC117599224 |
