Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU302834 |
| length | 391 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G255846 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 15948239 ~ 15948629 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU302833 | lncRNA | downstream | 187 | 15947850 ~ 15948052 (-) | True | G255845 |
| TU302824 | lncRNA | downstream | 39921 | 15906104 ~ 15908318 (-) | True | G255837 |
| TU302782 | lncRNA | downstream | 53453 | 15893416 ~ 15894786 (-) | True | G255796 |
| TU302775 | lncRNA | downstream | 57250 | 15883875 ~ 15890989 (-) | True | LOC113530984 |
| XR_003403202.2 | lncRNA | downstream | 57298 | 15884074 ~ 15890941 (-) | False | LOC113530984 |
| TU302839 | lncRNA | upstream | 2926 | 15951555 ~ 15951961 (-) | True | G255851 |
| TU302860 | lncRNA | upstream | 28291 | 15976920 ~ 15999160 (-) | True | G255872 |
| TU302856 | lncRNA | upstream | 43625 | 15992254 ~ 16035278 (-) | True | G255868 |
| TU302859 | lncRNA | upstream | 160991 | 16109620 ~ 16191399 (-) | True | G255871 |
| TU302872 | lncRNA | upstream | 185832 | 16134461 ~ 16135059 (-) | True | G255884 |
| XM_026920962.2 | mRNA | downstream | 127998 | 15658336 ~ 15820241 (-) | False | znf512b |
| XM_026920960.2 | mRNA | downstream | 127998 | 15658336 ~ 15820241 (-) | False | znf512b |
| XM_026920961.2 | mRNA | downstream | 127999 | 15658336 ~ 15820240 (-) | False | znf512b |
| XM_026920967.2 | mRNA | downstream | 127999 | 15658784 ~ 15820240 (-) | False | znf512b |
| XM_026920969.2 | mRNA | downstream | 127999 | 15659186 ~ 15820240 (-) | False | znf512b |
| XM_026920856.2 | mRNA | upstream | 625397 | 16574026 ~ 16587748 (-) | True | sars1 |
| XM_034311723.1 | mRNA | upstream | 692831 | 16641460 ~ 16647701 (-) | False | si:ch211-207e14.4 |
| XM_026920434.2 | mRNA | upstream | 692831 | 16641460 ~ 16647701 (-) | True | si:ch211-207e14.4 |
| XM_026920436.2 | mRNA | upstream | 692831 | 16641460 ~ 16647513 (-) | False | si:ch211-207e14.4 |
| XM_026920435.2 | mRNA | upstream | 692831 | 16641460 ~ 16647419 (-) | False | si:ch211-207e14.4 |
| TU302676 | other | downstream | 128085 | 15715035 ~ 15820154 (-) | False | znf512b |
| XR_003403204.1 | other | downstream | 460380 | 15487757 ~ 15487859 (-) | True | LOC113530990 |
| TU301948 | other | downstream | 1243969 | 14699272 ~ 14704270 (-) | False | G255071 |
| XR_004579684.1 | other | downstream | 1797658 | 14129216 ~ 14150581 (-) | True | LOC113530423 |
| XR_003403156.2 | other | upstream | 699194 | 16647823 ~ 16695030 (-) | False | fam50a |
| XR_004579669.1 | other | upstream | 864755 | 16813384 ~ 16831259 (-) | False | si:ch211-210c8.6 |
| XR_004579680.1 | other | upstream | 1727936 | 17676565 ~ 17695598 (-) | True | LOC117599224 |
| TU303855 | other | upstream | 1944452 | 17893081 ~ 17913277 (-) | False | kcng1 |
| XR_004579746.1 | other | upstream | 2336857 | 18285486 ~ 18300687 (-) | False | znf217 |
