Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU303054 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G256040 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 16497478 ~ 16497689 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU303013 | lncRNA | downstream | 118881 | 16367155 ~ 16378597 (-) | True | G256004 |
| TU302895 | lncRNA | downstream | 280783 | 16216479 ~ 16216695 (-) | True | G255904 |
| TU302894 | lncRNA | downstream | 282250 | 16215001 ~ 16215228 (-) | True | G255903 |
| TU302883 | lncRNA | downstream | 297146 | 16199900 ~ 16200332 (-) | True | G255892 |
| TU302852 | lncRNA | downstream | 316346 | 16174512 ~ 16181132 (-) | True | G255864 |
| TU303057 | lncRNA | upstream | 6249 | 16503938 ~ 16504167 (-) | True | G256043 |
| TU303061 | lncRNA | upstream | 10301 | 16507990 ~ 16508412 (-) | True | G256047 |
| XR_003403197.2 | lncRNA | upstream | 63035 | 16560724 ~ 16565473 (-) | True | LOC113530939 |
| TU303192 | lncRNA | upstream | 126777 | 16624466 ~ 16624772 (-) | True | G256163 |
| TU303193 | lncRNA | upstream | 128553 | 16626242 ~ 16626535 (-) | False | G256164 |
| XM_026920962.2 | mRNA | downstream | 677237 | 15658336 ~ 15820241 (-) | False | znf512b |
| XM_026920960.2 | mRNA | downstream | 677237 | 15658336 ~ 15820241 (-) | False | znf512b |
| XM_026920961.2 | mRNA | downstream | 677238 | 15658336 ~ 15820240 (-) | False | znf512b |
| XM_026920967.2 | mRNA | downstream | 677238 | 15658784 ~ 15820240 (-) | False | znf512b |
| XM_026920969.2 | mRNA | downstream | 677238 | 15659186 ~ 15820240 (-) | False | znf512b |
| XM_026920856.2 | mRNA | upstream | 76337 | 16574026 ~ 16587748 (-) | True | sars1 |
| XM_034311723.1 | mRNA | upstream | 143771 | 16641460 ~ 16647701 (-) | False | si:ch211-207e14.4 |
| XM_026920434.2 | mRNA | upstream | 143771 | 16641460 ~ 16647701 (-) | True | si:ch211-207e14.4 |
| XM_026920436.2 | mRNA | upstream | 143771 | 16641460 ~ 16647513 (-) | False | si:ch211-207e14.4 |
| XM_026920435.2 | mRNA | upstream | 143771 | 16641460 ~ 16647419 (-) | False | si:ch211-207e14.4 |
| TU302676 | other | downstream | 677324 | 15715035 ~ 15820154 (-) | False | znf512b |
| XR_003403204.1 | other | downstream | 1009619 | 15487757 ~ 15487859 (-) | True | LOC113530990 |
| TU301948 | other | downstream | 1793208 | 14699272 ~ 14704270 (-) | False | G255071 |
| XR_004579684.1 | other | downstream | 2346897 | 14129216 ~ 14150581 (-) | True | LOC113530423 |
| XR_003403156.2 | other | upstream | 150134 | 16647823 ~ 16695030 (-) | False | fam50a |
| XR_004579669.1 | other | upstream | 315695 | 16813384 ~ 16831259 (-) | False | si:ch211-210c8.6 |
| XR_004579680.1 | other | upstream | 1178876 | 17676565 ~ 17695598 (-) | True | LOC117599224 |
| TU303855 | other | upstream | 1395392 | 17893081 ~ 17913277 (-) | False | kcng1 |
| XR_004579746.1 | other | upstream | 1787797 | 18285486 ~ 18300687 (-) | False | znf217 |
