Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU303233 |
| length | 364 |
| lncRNA type | intronic |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G256197 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 16792917 ~ 16793280 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403153.2 | lncRNA | downstream | 10040 | 16781128 ~ 16782877 (-) | True | LOC113530431 |
| TU303191 | lncRNA | downstream | 155192 | 16636888 ~ 16637725 (-) | True | G256162 |
| TU303189 | lncRNA | downstream | 160469 | 16631392 ~ 16632448 (-) | True | G256160 |
| TU303198 | lncRNA | downstream | 163400 | 16628981 ~ 16629517 (-) | True | G256166 |
| TU303194 | lncRNA | downstream | 166300 | 16626242 ~ 16626617 (-) | True | G256164 |
| TU303235 | lncRNA | upstream | 1164 | 16794444 ~ 16794769 (-) | True | G256199 |
| TU303249 | lncRNA | upstream | 35935 | 16829215 ~ 16829435 (-) | True | G256212 |
| TU303245 | lncRNA | upstream | 58453 | 16851733 ~ 16852672 (-) | True | G256208 |
| TU303239 | lncRNA | upstream | 59717 | 16852997 ~ 16871152 (-) | False | dazap2 |
| TU303260 | lncRNA | upstream | 81282 | 16874562 ~ 16874767 (-) | True | G256223 |
| XM_034312254.1 | mRNA | downstream | 30224 | 16708190 ~ 16762693 (-) | False | cs |
| XM_026921164.2 | mRNA | downstream | 30313 | 16708190 ~ 16762604 (-) | True | cs |
| XM_026920437.2 | mRNA | downstream | 97886 | 16647823 ~ 16695031 (-) | True | fam50a |
| XM_026920434.2 | mRNA | downstream | 145216 | 16641460 ~ 16647701 (-) | True | si:ch211-207e14.4 |
| XM_034311603.1 | mRNA | upstream | 20104 | 16813384 ~ 16838649 (-) | False | si:ch211-210c8.6 |
| XM_026920854.2 | mRNA | upstream | 59648 | 16852928 ~ 16871164 (-) | True | dazap2 |
| XM_026920775.2 | mRNA | upstream | 331739 | 17125019 ~ 17171019 (-) | False | rapgef3 |
| XM_026920776.2 | mRNA | upstream | 331739 | 17125019 ~ 17160334 (-) | False | rapgef3 |
| XM_026920774.2 | mRNA | upstream | 331739 | 17125019 ~ 17160333 (-) | True | rapgef3 |
| XR_003403156.2 | other | downstream | 97887 | 16647823 ~ 16695030 (-) | False | fam50a |
| TU302676 | other | downstream | 972763 | 15715035 ~ 15820154 (-) | False | znf512b |
| XR_003403204.1 | other | downstream | 1305058 | 15487757 ~ 15487859 (-) | True | LOC113530990 |
| TU301948 | other | downstream | 2088647 | 14699272 ~ 14704270 (-) | False | G255071 |
| XR_004579687.1 | other | downstream | 2646086 | 14129216 ~ 14146831 (-) | False | LOC113530423 |
| XR_004579669.1 | other | upstream | 20104 | 16813384 ~ 16831259 (-) | False | si:ch211-210c8.6 |
| XR_004579680.1 | other | upstream | 883285 | 17676565 ~ 17695598 (-) | True | LOC117599224 |
| TU303855 | other | upstream | 1099801 | 17893081 ~ 17913277 (-) | False | kcng1 |
| XR_004579746.1 | other | upstream | 1492206 | 18285486 ~ 18300687 (-) | False | znf217 |
| TU304189 | other | upstream | 1715875 | 18509155 ~ 18513257 (-) | False | LOC113530839 |
