Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU303344 |
| length | 318 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G256296 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 17033891 ~ 17034208 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU303260 | lncRNA | downstream | 159124 | 16874562 ~ 16874767 (-) | True | G256223 |
| TU303239 | lncRNA | downstream | 162739 | 16852997 ~ 16871152 (-) | False | dazap2 |
| TU303245 | lncRNA | downstream | 181219 | 16851733 ~ 16852672 (-) | True | G256208 |
| TU303249 | lncRNA | downstream | 204456 | 16829215 ~ 16829435 (-) | True | G256212 |
| TU303235 | lncRNA | downstream | 239122 | 16794444 ~ 16794769 (-) | True | G256199 |
| TU303361 | lncRNA | upstream | 14444 | 17048652 ~ 17048999 (-) | True | G256313 |
| TU303416 | lncRNA | upstream | 69524 | 17103732 ~ 17106368 (-) | True | G256368 |
| TU303445 | lncRNA | upstream | 141476 | 17175684 ~ 17177230 (-) | True | G256393 |
| TU303456 | lncRNA | upstream | 156891 | 17191099 ~ 17193072 (-) | True | G256403 |
| TU303469 | lncRNA | upstream | 180636 | 17214844 ~ 17240869 (-) | True | G256413 |
| XM_026920854.2 | mRNA | downstream | 162727 | 16852928 ~ 16871164 (-) | True | dazap2 |
| XM_034311604.1 | mRNA | downstream | 195242 | 16787801 ~ 16838649 (-) | False | si:ch211-210c8.6 |
| XM_034311603.1 | mRNA | downstream | 195242 | 16813384 ~ 16838649 (-) | False | si:ch211-210c8.6 |
| XM_034311602.1 | mRNA | downstream | 202030 | 16787806 ~ 16831861 (-) | True | si:ch211-210c8.6 |
| XM_026921164.2 | mRNA | downstream | 271287 | 16708190 ~ 16762604 (-) | True | cs |
| XM_026920775.2 | mRNA | upstream | 90811 | 17125019 ~ 17171019 (-) | False | rapgef3 |
| XM_026920776.2 | mRNA | upstream | 90811 | 17125019 ~ 17160334 (-) | False | rapgef3 |
| XM_026920774.2 | mRNA | upstream | 90811 | 17125019 ~ 17160333 (-) | True | rapgef3 |
| XM_034311879.1 | mRNA | upstream | 174677 | 17208885 ~ 17226734 (-) | True | LOC113530577 |
| XM_026920713.2 | mRNA | upstream | 696504 | 17730712 ~ 17735744 (-) | True | LOC113530575 |
| XR_004579669.1 | other | downstream | 202632 | 16813384 ~ 16831259 (-) | False | si:ch211-210c8.6 |
| XR_003403156.2 | other | downstream | 338861 | 16647823 ~ 16695030 (-) | False | fam50a |
| TU302676 | other | downstream | 1213737 | 15715035 ~ 15820154 (-) | False | znf512b |
| XR_003403204.1 | other | downstream | 1546032 | 15487757 ~ 15487859 (-) | True | LOC113530990 |
| TU301948 | other | downstream | 2329621 | 14699272 ~ 14704270 (-) | False | G255071 |
| XR_004579680.1 | other | upstream | 642357 | 17676565 ~ 17695598 (-) | True | LOC117599224 |
| TU303855 | other | upstream | 858873 | 17893081 ~ 17913277 (-) | False | kcng1 |
| XR_004579746.1 | other | upstream | 1251278 | 18285486 ~ 18300687 (-) | False | znf217 |
| TU304189 | other | upstream | 1474947 | 18509155 ~ 18513257 (-) | False | LOC113530839 |
| XR_004579689.1 | other | upstream | 1903702 | 18937910 ~ 19064582 (-) | False | lrp1ab |
