Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU303379 |
| length | 1074 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G256331 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 17106717 ~ 17108738 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU303370 | lncRNA | upstream | 48220 | 17058192 ~ 17058497 (+) | True | G256322 |
| TU303367 | lncRNA | upstream | 51626 | 17054866 ~ 17055091 (+) | True | G256319 |
| XR_003403182.2 | lncRNA | upstream | 55786 | 17048077 ~ 17050931 (+) | True | LOC113530783 |
| TU303360 | lncRNA | upstream | 57625 | 17048904 ~ 17049092 (+) | False | LOC113530783 |
| TU303285 | lncRNA | upstream | 183314 | 16922911 ~ 16923403 (+) | True | G256239 |
| TU303434 | lncRNA | downstream | 66963 | 17175701 ~ 17176152 (+) | False | LOC113530386 |
| TU303435 | lncRNA | downstream | 66963 | 17175701 ~ 17176062 (+) | False | LOC113530386 |
| TU303458 | lncRNA | downstream | 88941 | 17197679 ~ 17197916 (+) | True | G256405 |
| TU303461 | lncRNA | downstream | 132150 | 17240888 ~ 17241933 (+) | True | G256408 |
| TU303485 | lncRNA | downstream | 157772 | 17266510 ~ 17266732 (+) | True | G256425 |
| XM_026920744.2 | mRNA | upstream | 72441 | 17005065 ~ 17034276 (+) | True | csrnp2 |
| XM_026920841.2 | mRNA | upstream | 146151 | 16936562 ~ 16960566 (+) | True | tfcp2 |
| XM_034311788.1 | mRNA | upstream | 192645 | 16878658 ~ 16914072 (+) | False | pou6f1 |
| XM_026920984.2 | mRNA | downstream | 63454 | 17172192 ~ 17175513 (+) | True | slc48a1a |
| XM_026920301.2 | mRNA | downstream | 66969 | 17175707 ~ 17188377 (+) | True | LOC113530386 |
| XM_034312245.1 | mRNA | downstream | 69110 | 17177848 ~ 17188377 (+) | False | LOC113530386 |
| XM_026920352.2 | mRNA | downstream | 81141 | 17189879 ~ 17194246 (+) | True | hrct1 |
| XM_026920718.2 | mRNA | downstream | 318564 | 17427302 ~ 17627058 (+) | True | plxna2 |
| TU303060 | other | upstream | 598337 | 16508025 ~ 16508380 (+) | True | G256046 |
| TU302910 | other | upstream | 710505 | 16373242 ~ 16396212 (+) | False | LOC113530371 |
| XR_003403143.2 | other | upstream | 711717 | 16363549 ~ 16395000 (+) | False | LOC113530371 |
| XR_004579698.1 | other | upstream | 877311 | 16210650 ~ 16229406 (+) | False | LOC113530889 |
| TU302132 | other | upstream | 1939049 | 15117112 ~ 15167668 (+) | False | rps21 |
| TU304341 | other | downstream | 1770830 | 18879568 ~ 18911714 (+) | False | fmnl3 |
| trnae-cuc_34 | other | downstream | 1924179 | 19032917 ~ 19032988 (+) | True | trnae-cuc_34 |
| TU304946 | other | downstream | 2369564 | 19478302 ~ 19478895 (+) | True | G257622 |
| TU305571 | other | downstream | 3282071 | 20390809 ~ 20398714 (+) | True | G258096 |
| XR_003403172.2 | other | downstream | 3401506 | 20510244 ~ 20514195 (+) | False | LOC113530729 |
