Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU303469 |
| length | 606 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G256413 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 17214844 ~ 17240869 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU303456 | lncRNA | downstream | 21772 | 17191099 ~ 17193072 (-) | True | G256403 |
| TU303445 | lncRNA | downstream | 37614 | 17175684 ~ 17177230 (-) | True | G256393 |
| TU303416 | lncRNA | downstream | 108476 | 17103732 ~ 17106368 (-) | True | G256368 |
| TU303361 | lncRNA | downstream | 165845 | 17048652 ~ 17048999 (-) | True | G256313 |
| TU303344 | lncRNA | downstream | 180636 | 17033891 ~ 17034208 (-) | True | G256296 |
| XR_003403190.2 | lncRNA | upstream | 76769 | 17317638 ~ 17320983 (-) | True | LOC113530885 |
| XR_003403191.2 | lncRNA | upstream | 80553 | 17321422 ~ 17323140 (-) | True | LOC113530886 |
| TU303641 | lncRNA | upstream | 382316 | 17623185 ~ 17623422 (-) | True | G256567 |
| TU303646 | lncRNA | upstream | 385450 | 17626319 ~ 17628461 (-) | True | G256569 |
| TU303643 | lncRNA | upstream | 385685 | 17626554 ~ 17628461 (-) | False | G256569 |
| XM_026920775.2 | mRNA | downstream | 43825 | 17125019 ~ 17171019 (-) | False | rapgef3 |
| XM_026920776.2 | mRNA | downstream | 54510 | 17125019 ~ 17160334 (-) | False | rapgef3 |
| XM_026920774.2 | mRNA | downstream | 54511 | 17125019 ~ 17160333 (-) | True | rapgef3 |
| XM_026920854.2 | mRNA | downstream | 343680 | 16852928 ~ 16871164 (-) | True | dazap2 |
| XM_034311604.1 | mRNA | downstream | 376195 | 16787801 ~ 16838649 (-) | False | si:ch211-210c8.6 |
| XM_026920713.2 | mRNA | upstream | 489843 | 17730712 ~ 17735744 (-) | True | LOC113530575 |
| XM_026920241.2 | mRNA | upstream | 506413 | 17747282 ~ 17754344 (-) | True | taf8 |
| XM_026921214.2 | mRNA | upstream | 514723 | 17755592 ~ 17756555 (-) | True | g0s2 |
| XM_026920975.2 | mRNA | upstream | 525340 | 17766209 ~ 17778850 (-) | False | camk1gb |
| XM_026920974.2 | mRNA | upstream | 525340 | 17766209 ~ 17778675 (-) | True | camk1gb |
| XR_004579669.1 | other | downstream | 383585 | 16813384 ~ 16831259 (-) | False | si:ch211-210c8.6 |
| XR_003403156.2 | other | downstream | 519814 | 16647823 ~ 16695030 (-) | False | fam50a |
| TU302676 | other | downstream | 1394690 | 15715035 ~ 15820154 (-) | False | znf512b |
| XR_003403204.1 | other | downstream | 1726985 | 15487757 ~ 15487859 (-) | True | LOC113530990 |
| TU301948 | other | downstream | 2510574 | 14699272 ~ 14704270 (-) | False | G255071 |
| XR_004579680.1 | other | upstream | 435696 | 17676565 ~ 17695598 (-) | True | LOC117599224 |
| TU303855 | other | upstream | 652212 | 17893081 ~ 17913277 (-) | False | kcng1 |
| XR_004579746.1 | other | upstream | 1044617 | 18285486 ~ 18300687 (-) | False | znf217 |
| TU304189 | other | upstream | 1268286 | 18509155 ~ 18513257 (-) | False | LOC113530839 |
| XR_004579689.1 | other | upstream | 1697041 | 18937910 ~ 19064582 (-) | False | lrp1ab |
