Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU304014 |
| length | 381 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G256899 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 18322069 ~ 18328256 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU304013 | lncRNA | upstream | 2162 | 18322069 ~ 18324070 (+) | False | G256899 |
| TU303952 | lncRNA | upstream | 245900 | 18078167 ~ 18080332 (+) | True | G256851 |
| TU303953 | lncRNA | upstream | 248420 | 18076948 ~ 18077812 (+) | True | G256852 |
| TU303870 | lncRNA | upstream | 381133 | 17944895 ~ 17945099 (+) | True | G256772 |
| TU303869 | lncRNA | upstream | 382877 | 17943151 ~ 17943355 (+) | True | G256771 |
| TU304259 | lncRNA | downstream | 291993 | 18620249 ~ 18621066 (+) | False | G257068 |
| TU304260 | lncRNA | downstream | 291993 | 18620249 ~ 18621175 (+) | False | G257068 |
| TU304261 | lncRNA | downstream | 291993 | 18620249 ~ 18621305 (+) | True | G257068 |
| XR_003403140.2 | lncRNA | downstream | 513497 | 18841753 ~ 18843237 (+) | False | LOC113530356 |
| TU304314 | lncRNA | downstream | 513532 | 18841788 ~ 18846170 (+) | True | LOC113530356 |
| XM_034312065.1 | mRNA | upstream | 85320 | 18193197 ~ 18240912 (+) | True | LOC113530861 |
| XM_026921224.2 | mRNA | upstream | 85320 | 18226863 ~ 18240912 (+) | False | LOC113530861 |
| XM_034312066.1 | mRNA | upstream | 85320 | 18229077 ~ 18240912 (+) | False | LOC113530861 |
| XM_026920242.2 | mRNA | upstream | 579703 | 17739271 ~ 17746529 (+) | True | si:ch211-66i15.4 |
| XM_026920971.2 | mRNA | downstream | 18519 | 18346775 ~ 18351473 (+) | True | pfdn4 |
| XM_026920076.2 | mRNA | downstream | 162225 | 18490481 ~ 18497402 (+) | True | cd40 |
| XM_026920100.2 | mRNA | downstream | 282897 | 18611153 ~ 18620055 (+) | False | casp9 |
| XM_026920099.2 | mRNA | downstream | 282899 | 18611155 ~ 18620055 (+) | True | casp9 |
| XM_026920103.2 | mRNA | downstream | 282899 | 18611155 ~ 18620055 (+) | False | casp9 |
| XR_004579712.1 | other | upstream | 1205291 | 17071136 ~ 17120941 (+) | False | itga5 |
| TU303060 | other | upstream | 1817852 | 16508025 ~ 16508380 (+) | True | G256046 |
| TU302910 | other | upstream | 1930020 | 16373242 ~ 16396212 (+) | False | LOC113530371 |
| XR_003403143.2 | other | upstream | 1931232 | 16363549 ~ 16395000 (+) | False | LOC113530371 |
| XR_004579698.1 | other | upstream | 2096826 | 16210650 ~ 16229406 (+) | False | LOC113530889 |
| TU304341 | other | downstream | 551312 | 18879568 ~ 18911714 (+) | False | fmnl3 |
| trnae-cuc_34 | other | downstream | 704661 | 19032917 ~ 19032988 (+) | True | trnae-cuc_34 |
| TU304946 | other | downstream | 1150046 | 19478302 ~ 19478895 (+) | True | G257622 |
| TU305571 | other | downstream | 2062553 | 20390809 ~ 20398714 (+) | True | G258096 |
| XR_003403172.2 | other | downstream | 2181988 | 20510244 ~ 20514195 (+) | False | LOC113530729 |
