Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU304358 |
| length | 805 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G257127 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 18891889 ~ 18936842 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU304316 | lncRNA | upstream | 49510 | 18841788 ~ 18846347 (+) | False | LOC113530356 |
| TU304314 | lncRNA | upstream | 49687 | 18841788 ~ 18846170 (+) | True | LOC113530356 |
| XR_003403140.2 | lncRNA | upstream | 52620 | 18841753 ~ 18843237 (+) | False | LOC113530356 |
| TU304261 | lncRNA | upstream | 274552 | 18620249 ~ 18621305 (+) | True | G257068 |
| TU304260 | lncRNA | upstream | 274682 | 18620249 ~ 18621175 (+) | False | G257068 |
| TU304435 | lncRNA | downstream | 129435 | 19065854 ~ 19066133 (+) | True | G257196 |
| TU304438 | lncRNA | downstream | 181458 | 19117877 ~ 19118533 (+) | True | G257199 |
| TU304467 | lncRNA | downstream | 262127 | 19198546 ~ 19222505 (+) | False | pkig |
| TU304470 | lncRNA | downstream | 266917 | 19203336 ~ 19222505 (+) | True | pkig |
| TU304478 | lncRNA | downstream | 296584 | 19233003 ~ 19235261 (+) | True | G257235 |
| XM_026920254.2 | mRNA | upstream | 18511 | 18850483 ~ 18877346 (+) | True | esyt1a |
| XM_026920251.2 | mRNA | upstream | 58917 | 18829063 ~ 18836940 (+) | True | pa2g4b |
| XM_034311883.1 | mRNA | upstream | 69752 | 18786766 ~ 18826105 (+) | True | erbb3b |
| XM_034311795.1 | mRNA | upstream | 118885 | 18725277 ~ 18776972 (+) | False | si:dkey-151g10.3 |
| XM_034311666.1 | mRNA | downstream | 33575 | 18969994 ~ 18971248 (+) | True | LOC117599226 |
| XM_034311662.1 | mRNA | downstream | 154591 | 19091010 ~ 19117563 (+) | True | rbms2b |
| XM_034311663.1 | mRNA | downstream | 154595 | 19091014 ~ 19117563 (+) | False | rbms2b |
| XM_034311661.1 | mRNA | downstream | 154598 | 19091017 ~ 19117563 (+) | False | rbms2b |
| XM_026920224.2 | mRNA | downstream | 224794 | 19161213 ~ 19165261 (+) | True | r3hdml |
| XR_004579712.1 | other | upstream | 1774916 | 17071136 ~ 17120941 (+) | False | itga5 |
| TU303060 | other | upstream | 2387477 | 16508025 ~ 16508380 (+) | True | G256046 |
| TU302910 | other | upstream | 2499645 | 16373242 ~ 16396212 (+) | False | LOC113530371 |
| XR_003403143.2 | other | upstream | 2500857 | 16363549 ~ 16395000 (+) | False | LOC113530371 |
| XR_004579698.1 | other | upstream | 2666451 | 16210650 ~ 16229406 (+) | False | LOC113530889 |
| trnae-cuc_34 | other | downstream | 96498 | 19032917 ~ 19032988 (+) | True | trnae-cuc_34 |
| TU304946 | other | downstream | 541883 | 19478302 ~ 19478895 (+) | True | G257622 |
| TU305571 | other | downstream | 1454390 | 20390809 ~ 20398714 (+) | True | G258096 |
| XR_003403172.2 | other | downstream | 1573825 | 20510244 ~ 20514195 (+) | False | LOC113530729 |
| XR_004579743.1 | other | downstream | 1966686 | 20903105 ~ 20907250 (+) | False | ubxn10 |
