Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403141.2 |
| length | 398 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | LOC113530357 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 18809063 ~ 18863122 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU304576 | lncRNA | downstream | 190760 | 18653093 ~ 18653315 (-) | True | G257322 |
| TU304084 | lncRNA | downstream | 494383 | 18348843 ~ 18349692 (-) | True | G256929 |
| TU304027 | lncRNA | downstream | 557984 | 18285815 ~ 18286091 (-) | False | znf217 |
| TU303854 | lncRNA | downstream | 958496 | 17884243 ~ 17885579 (-) | False | kcng1 |
| TU303780 | lncRNA | downstream | 1053168 | 17790641 ~ 17790907 (-) | True | G256689 |
| TU304741 | lncRNA | upstream | 82732 | 18934897 ~ 18936391 (-) | True | G257458 |
| TU304757 | lncRNA | upstream | 87317 | 18939482 ~ 18939782 (-) | True | G257471 |
| XR_004579694.1 | lncRNA | upstream | 265684 | 19117849 ~ 19119020 (-) | True | LOC117599228 |
| TU304768 | lncRNA | upstream | 265787 | 19117952 ~ 19118565 (-) | False | LOC117599228 |
| XR_004579693.1 | lncRNA | upstream | 306126 | 19158291 ~ 19178092 (-) | False | LOC113530339 |
| XM_026920788.2 | mRNA | downstream | 140151 | 18693407 ~ 18703924 (-) | True | idh3g |
| XM_026920149.2 | mRNA | downstream | 168863 | 18657095 ~ 18675212 (-) | True | avpr2aa |
| XM_034311882.1 | mRNA | downstream | 236657 | 18565524 ~ 18607418 (-) | True | LOC117595686 |
| XM_034311881.1 | mRNA | downstream | 278548 | 18540263 ~ 18565527 (-) | True | plekhg5b |
| XM_026921195.2 | mRNA | downstream | 312823 | 18509148 ~ 18531252 (-) | True | LOC113530839 |
| XM_034311652.1 | mRNA | upstream | 84412 | 18936577 ~ 19064473 (-) | False | lrp1ab |
| XM_034311653.1 | mRNA | upstream | 84412 | 18936577 ~ 19064473 (-) | True | lrp1ab |
| XM_026920189.2 | mRNA | upstream | 266866 | 19119031 ~ 19127613 (-) | False | si:dkey-21c19.3 |
| XM_026920188.2 | mRNA | upstream | 266866 | 19119031 ~ 19127613 (-) | True | si:dkey-21c19.3 |
| XM_026920220.2 | mRNA | upstream | 277943 | 19130108 ~ 19142474 (-) | True | LOC113530333 |
| TU304189 | other | downstream | 330818 | 18509155 ~ 18513257 (-) | False | LOC113530839 |
| XR_004579746.1 | other | downstream | 543388 | 18285486 ~ 18300687 (-) | False | znf217 |
| TU303855 | other | downstream | 930798 | 17893081 ~ 17913277 (-) | False | kcng1 |
| XR_004579680.1 | other | downstream | 1148477 | 17676565 ~ 17695598 (-) | True | LOC117599224 |
| XR_004579669.1 | other | downstream | 2012816 | 16813384 ~ 16831259 (-) | False | si:ch211-210c8.6 |
| XR_004579689.1 | other | upstream | 85745 | 18937910 ~ 19064582 (-) | False | lrp1ab |
| trnak-uuu_17 | other | upstream | 276299 | 19128464 ~ 19128536 (-) | True | trnak-uuu_17 |
| XR_004579690.1 | other | upstream | 518522 | 19370687 ~ 19387041 (-) | False | LOC113530570 |
| TU305224 | other | upstream | 763362 | 19615527 ~ 19621560 (-) | False | magi3a |
| XR_003403201.2 | other | upstream | 1248834 | 20100999 ~ 20109210 (-) | True | kansl2 |
