Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU304741 |
| length | 1184 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 3 |
| gene id | G257458 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 18934897 ~ 18936391 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU304683 | lncRNA | downstream | 71775 | 18809063 ~ 18863122 (-) | False | LOC113530357 |
| TU304681 | lncRNA | downstream | 74109 | 18809063 ~ 18860788 (-) | True | LOC113530357 |
| TU304682 | lncRNA | downstream | 82680 | 18809063 ~ 18852217 (-) | False | LOC113530357 |
| XR_003403141.2 | lncRNA | downstream | 82732 | 18844075 ~ 18852165 (-) | False | LOC113530357 |
| TU304576 | lncRNA | downstream | 281582 | 18653093 ~ 18653315 (-) | True | G257322 |
| TU304757 | lncRNA | upstream | 3091 | 18939482 ~ 18939782 (-) | True | G257471 |
| XR_004579694.1 | lncRNA | upstream | 181458 | 19117849 ~ 19119020 (-) | True | LOC117599228 |
| TU304768 | lncRNA | upstream | 181561 | 19117952 ~ 19118565 (-) | False | LOC117599228 |
| XR_004579693.1 | lncRNA | upstream | 221900 | 19158291 ~ 19178092 (-) | False | LOC113530339 |
| XR_004579692.1 | lncRNA | upstream | 221900 | 19158291 ~ 19163160 (-) | False | LOC113530339 |
| XM_026920788.2 | mRNA | downstream | 230973 | 18693407 ~ 18703924 (-) | True | idh3g |
| XM_026920149.2 | mRNA | downstream | 259685 | 18657095 ~ 18675212 (-) | True | avpr2aa |
| XM_034311882.1 | mRNA | downstream | 327479 | 18565524 ~ 18607418 (-) | True | LOC117595686 |
| XM_034311881.1 | mRNA | downstream | 369370 | 18540263 ~ 18565527 (-) | True | plekhg5b |
| XM_026921195.2 | mRNA | downstream | 403645 | 18509148 ~ 18531252 (-) | True | LOC113530839 |
| XM_034311652.1 | mRNA | upstream | 186 | 18936577 ~ 19064473 (-) | False | lrp1ab |
| XM_034311653.1 | mRNA | upstream | 186 | 18936577 ~ 19064473 (-) | True | lrp1ab |
| XM_026920189.2 | mRNA | upstream | 182640 | 19119031 ~ 19127613 (-) | False | si:dkey-21c19.3 |
| XM_026920188.2 | mRNA | upstream | 182640 | 19119031 ~ 19127613 (-) | True | si:dkey-21c19.3 |
| XM_026920220.2 | mRNA | upstream | 193717 | 19130108 ~ 19142474 (-) | True | LOC113530333 |
| TU304189 | other | downstream | 421640 | 18509155 ~ 18513257 (-) | False | LOC113530839 |
| XR_004579746.1 | other | downstream | 634210 | 18285486 ~ 18300687 (-) | False | znf217 |
| TU303855 | other | downstream | 1021620 | 17893081 ~ 17913277 (-) | False | kcng1 |
| XR_004579680.1 | other | downstream | 1239299 | 17676565 ~ 17695598 (-) | True | LOC117599224 |
| XR_004579669.1 | other | downstream | 2103638 | 16813384 ~ 16831259 (-) | False | si:ch211-210c8.6 |
| XR_004579689.1 | other | upstream | 1519 | 18937910 ~ 19064582 (-) | False | lrp1ab |
| trnak-uuu_17 | other | upstream | 192073 | 19128464 ~ 19128536 (-) | True | trnak-uuu_17 |
| XR_004579690.1 | other | upstream | 434296 | 19370687 ~ 19387041 (-) | False | LOC113530570 |
| TU305224 | other | upstream | 679136 | 19615527 ~ 19621560 (-) | False | magi3a |
| XR_003403201.2 | other | upstream | 1164608 | 20100999 ~ 20109210 (-) | True | kansl2 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | TU19451 | True | 1986 | lncRNA | 0.42 | 2 | CI01000001 | 9213456 ~ 9273959 (+) |
