Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU305195 |
| length | 511 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G257813 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 20065477 ~ 20066008 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU305133 | lncRNA | upstream | 55373 | 20008639 ~ 20010104 (+) | True | G257774 |
| TU305143 | lncRNA | upstream | 57323 | 20007952 ~ 20008154 (+) | True | G257781 |
| TU305053 | lncRNA | upstream | 319531 | 19743485 ~ 19745946 (+) | True | G257713 |
| TU305050 | lncRNA | upstream | 330264 | 19733351 ~ 19735213 (+) | True | G257710 |
| TU305000 | lncRNA | upstream | 398892 | 19660638 ~ 19666585 (+) | True | G257671 |
| TU305196 | lncRNA | downstream | 33222 | 20099230 ~ 20099498 (+) | True | G257814 |
| TU305178 | lncRNA | downstream | 35000 | 20101008 ~ 20104040 (+) | True | G257802 |
| TU305179 | lncRNA | downstream | 42382 | 20108390 ~ 20109226 (+) | False | G257803 |
| TU305180 | lncRNA | downstream | 42382 | 20108390 ~ 20109226 (+) | True | G257803 |
| TU305574 | lncRNA | downstream | 303987 | 20369995 ~ 20386813 (+) | True | G258097 |
| XM_026921316.2 | mRNA | upstream | 21810 | 20037421 ~ 20043667 (+) | True | sdf4 |
| XM_026921359.2 | mRNA | upstream | 100064 | 19900014 ~ 19965413 (+) | True | syt6a |
| XM_026920864.2 | mRNA | upstream | 216816 | 19840853 ~ 19848661 (+) | True | zbtb48 |
| XM_026920527.2 | mRNA | downstream | 53942 | 20119950 ~ 20127658 (+) | True | ccnt1 |
| XM_034311543.1 | mRNA | downstream | 63698 | 20129706 ~ 20138298 (+) | True | pmelb |
| XM_034311545.1 | mRNA | downstream | 81170 | 20147178 ~ 20150405 (+) | False | LOC113530927 |
| XM_034311546.1 | mRNA | downstream | 82644 | 20148652 ~ 20155096 (+) | False | LOC113530927 |
| XM_026921333.2 | mRNA | downstream | 82644 | 20148652 ~ 20150405 (+) | False | LOC113530927 |
| TU304946 | other | upstream | 586582 | 19478302 ~ 19478895 (+) | True | G257622 |
| trnae-cuc_34 | other | upstream | 1032489 | 19032917 ~ 19032988 (+) | True | trnae-cuc_34 |
| TU304341 | other | upstream | 1153763 | 18879568 ~ 18911714 (+) | False | fmnl3 |
| XR_004579712.1 | other | upstream | 2944536 | 17071136 ~ 17120941 (+) | False | itga5 |
| TU303060 | other | upstream | 3557097 | 16508025 ~ 16508380 (+) | True | G256046 |
| TU305571 | other | downstream | 324801 | 20390809 ~ 20398714 (+) | True | G258096 |
| XR_003403172.2 | other | downstream | 444236 | 20510244 ~ 20514195 (+) | False | LOC113530729 |
| XR_004579743.1 | other | downstream | 837097 | 20903105 ~ 20907250 (+) | False | ubxn10 |
| TU305940 | other | downstream | 837139 | 20903147 ~ 20905073 (+) | False | ubxn10 |
| TU306101 | other | downstream | 1162312 | 21228320 ~ 21230871 (+) | False | si:ch73-290k24.5 |
