Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU305741 |
| length | 253 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G258232 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 20470193 ~ 20487410 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0042383 | sarcolemma | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU305692 | lncRNA | downstream | 67933 | 20376338 ~ 20402260 (-) | True | G258198 |
| TU305690 | lncRNA | downstream | 97013 | 20364055 ~ 20373180 (-) | True | LOC117599243 |
| XR_004579708.1 | lncRNA | downstream | 98893 | 20369449 ~ 20371300 (-) | False | LOC117599243 |
| XR_004579709.1 | lncRNA | downstream | 98893 | 20369449 ~ 20371300 (-) | False | LOC117599243 |
| XR_003403139.2 | lncRNA | downstream | 138582 | 20314362 ~ 20331611 (-) | True | LOC113530344 |
| TU305681 | lncRNA | upstream | 23756 | 20511166 ~ 20516713 (-) | True | G258189 |
| TU305676 | lncRNA | upstream | 31015 | 20518425 ~ 20520203 (-) | False | nfe2 |
| TU305751 | lncRNA | upstream | 35142 | 20522552 ~ 20523645 (-) | True | G258242 |
| TU305773 | lncRNA | upstream | 102348 | 20589758 ~ 20593161 (-) | True | G258258 |
| TU305785 | lncRNA | upstream | 122901 | 20610311 ~ 20611059 (-) | True | G258268 |
| XM_034311842.1 | mRNA | downstream | 182980 | 20274622 ~ 20287213 (-) | False | calcoco1a |
| XM_026920639.2 | mRNA | downstream | 182981 | 20274622 ~ 20287212 (-) | True | calcoco1a |
| XM_026920084.2 | mRNA | downstream | 248080 | 20205272 ~ 20222113 (-) | True | nr1d4a |
| XM_026921228.2 | mRNA | downstream | 268448 | 20198866 ~ 20201745 (-) | True | mfsd5 |
| XM_026921330.2 | mRNA | downstream | 290503 | 20155949 ~ 20179690 (-) | True | jph2 |
| XM_026920991.2 | mRNA | upstream | 11868 | 20499278 ~ 20509708 (-) | False | cbx5 |
| XM_026920990.2 | mRNA | upstream | 11868 | 20499278 ~ 20509706 (-) | True | cbx5 |
| XM_034312053.1 | mRNA | upstream | 11868 | 20499278 ~ 20508696 (-) | False | cbx5 |
| XM_026920986.2 | mRNA | upstream | 31935 | 20519345 ~ 20525464 (-) | False | nfe2 |
| XM_034312052.1 | mRNA | upstream | 31935 | 20519345 ~ 20525464 (-) | True | nfe2 |
| TU305550 | other | downstream | 198286 | 20252170 ~ 20271907 (-) | True | G258077 |
| XR_004579656.1 | other | downstream | 350244 | 20110463 ~ 20119949 (-) | False | mlh3 |
| XR_003403201.2 | other | downstream | 360983 | 20100999 ~ 20109210 (-) | True | kansl2 |
| XR_003403208.1 | other | downstream | 366282 | 20103774 ~ 20103911 (-) | True | LOC113530994 |
| TU305224 | other | downstream | 848633 | 19615527 ~ 19621560 (-) | False | magi3a |
| TU305957 | other | upstream | 343418 | 20830828 ~ 20867958 (-) | False | LOC117599256 |
| TU306159 | other | upstream | 681576 | 21168986 ~ 21169698 (-) | True | G258580 |
| trnaq-uug_7 | other | upstream | 867216 | 21354626 ~ 21354697 (-) | False | trnaq-uug_7 |
| XR_004579748.1 | other | upstream | 1441765 | 21929175 ~ 21954605 (-) | False | fyco1a |
| TU306971 | other | upstream | 1958620 | 22446030 ~ 22449427 (-) | True | G259306 |
