Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU305993 |
| length | 227 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G258437 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 20953626 ~ 20953852 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU305980 | lncRNA | downstream | 50869 | 20901278 ~ 20902757 (-) | True | G258427 |
| TU305972 | lncRNA | downstream | 69531 | 20883799 ~ 20884095 (-) | True | G258424 |
| TU305953 | lncRNA | downstream | 176917 | 20776149 ~ 20776709 (-) | True | G258411 |
| TU305785 | lncRNA | downstream | 342567 | 20610311 ~ 20611059 (-) | True | G258268 |
| TU305773 | lncRNA | downstream | 360465 | 20589758 ~ 20593161 (-) | True | G258258 |
| TU305999 | lncRNA | upstream | 19545 | 20973397 ~ 20976261 (-) | True | camk2n1b |
| TU306176 | lncRNA | upstream | 200054 | 21153906 ~ 21167598 (-) | True | G258596 |
| TU306206 | lncRNA | upstream | 284184 | 21238036 ~ 21241060 (-) | True | G258626 |
| TU306265 | lncRNA | upstream | 400587 | 21354439 ~ 21354687 (-) | True | trnaq-uug_7 |
| TU306289 | lncRNA | upstream | 421046 | 21374898 ~ 21375103 (-) | True | G258700 |
| XM_026921038.2 | mRNA | downstream | 38517 | 20906009 ~ 20915109 (-) | True | zgc:193690 |
| XM_034312194.1 | mRNA | downstream | 53715 | 20886166 ~ 20899911 (-) | False | ints11 |
| XM_026920243.2 | mRNA | downstream | 53716 | 20887100 ~ 20899910 (-) | True | ints11 |
| XM_034311888.1 | mRNA | downstream | 85622 | 20829388 ~ 20868004 (-) | True | LOC117599256 |
| XM_034312015.1 | mRNA | downstream | 141102 | 20783966 ~ 20812524 (-) | False | acap3a |
| XM_026920970.2 | mRNA | upstream | 20532 | 20974384 ~ 20976330 (-) | False | camk2n1b |
| XM_026920080.2 | mRNA | upstream | 25086 | 20978938 ~ 20983549 (-) | True | mul1b |
| XM_026921223.2 | mRNA | upstream | 85539 | 21039391 ~ 21047873 (-) | True | LOC113530858 |
| XM_034311562.1 | mRNA | upstream | 120361 | 21074213 ~ 21083989 (-) | False | dnajc16 |
| XM_034311563.1 | mRNA | upstream | 120361 | 21074213 ~ 21083989 (-) | False | dnajc16 |
| TU305957 | other | downstream | 85668 | 20830828 ~ 20867958 (-) | False | LOC117599256 |
| TU305550 | other | downstream | 681719 | 20252170 ~ 20271907 (-) | True | G258077 |
| XR_004579656.1 | other | downstream | 833677 | 20110463 ~ 20119949 (-) | False | mlh3 |
| XR_003403201.2 | other | downstream | 844416 | 20100999 ~ 20109210 (-) | True | kansl2 |
| TU306159 | other | upstream | 215134 | 21168986 ~ 21169698 (-) | True | G258580 |
| trnaq-uug_7 | other | upstream | 400774 | 21354626 ~ 21354697 (-) | False | trnaq-uug_7 |
| XR_004579748.1 | other | upstream | 975323 | 21929175 ~ 21954605 (-) | False | fyco1a |
| TU306971 | other | upstream | 1492178 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579695.1 | other | upstream | 2244730 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
