Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU306047 |
| length | 490 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G258476 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 21093329 ~ 21093844 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU306029 | lncRNA | upstream | 5107 | 21085382 ~ 21088222 (+) | True | G258460 |
| TU305997 | lncRNA | upstream | 116970 | 20975898 ~ 20976359 (+) | True | G258439 |
| XR_004579744.1 | lncRNA | upstream | 182247 | 20908816 ~ 20911082 (+) | True | LOC117599282 |
| TU305939 | lncRNA | upstream | 185870 | 20903147 ~ 20907459 (+) | False | ubxn10 |
| TU305900 | lncRNA | upstream | 303184 | 20786242 ~ 20790145 (+) | True | G258362 |
| TU306054 | lncRNA | downstream | 9870 | 21103714 ~ 21105101 (+) | True | G258483 |
| TU306031 | lncRNA | downstream | 13503 | 21107347 ~ 21108015 (+) | True | G258462 |
| TU306028 | lncRNA | downstream | 21206 | 21115050 ~ 21132053 (+) | True | G258459 |
| TU306264 | lncRNA | downstream | 260596 | 21354440 ~ 21354730 (+) | True | G258680 |
| TU306276 | lncRNA | downstream | 290447 | 21384291 ~ 21386101 (+) | True | G258689 |
| XM_026920253.2 | mRNA | upstream | 20272 | 21068173 ~ 21073057 (+) | True | agmat |
| XM_026921415.2 | mRNA | upstream | 26112 | 21063095 ~ 21067217 (+) | True | pink1 |
| XM_026921161.2 | mRNA | upstream | 30952 | 21059776 ~ 21062377 (+) | True | cdaa |
| XM_034312061.1 | mRNA | upstream | 36823 | 21052840 ~ 21056506 (+) | False | LOC113530567 |
| XM_026920598.2 | mRNA | downstream | 44381 | 21138225 ~ 21171926 (+) | False | si:ch73-217b7.1 |
| XM_026920596.2 | mRNA | downstream | 49191 | 21143035 ~ 21171926 (+) | False | si:ch73-217b7.1 |
| XM_026920595.2 | mRNA | downstream | 49192 | 21143036 ~ 21171926 (+) | True | si:ch73-217b7.1 |
| XM_026920597.2 | mRNA | downstream | 49193 | 21143037 ~ 21171926 (+) | False | si:ch73-217b7.1 |
| XM_026920599.2 | mRNA | downstream | 49194 | 21143038 ~ 21171926 (+) | False | si:ch73-217b7.1 |
| XR_004579743.1 | other | upstream | 186079 | 20903105 ~ 20907250 (+) | False | ubxn10 |
| TU305940 | other | upstream | 188256 | 20903147 ~ 20905073 (+) | False | ubxn10 |
| XR_003403172.2 | other | upstream | 579134 | 20510244 ~ 20514195 (+) | False | LOC113530729 |
| TU305571 | other | upstream | 694615 | 20390809 ~ 20398714 (+) | True | G258096 |
| TU304946 | other | upstream | 1614434 | 19478302 ~ 19478895 (+) | True | G257622 |
| TU306101 | other | downstream | 134476 | 21228320 ~ 21230871 (+) | False | si:ch73-290k24.5 |
| TU306357 | other | downstream | 444410 | 21538254 ~ 21542254 (+) | False | LOC117599233 |
| trnal-uaa_2 | other | downstream | 1217962 | 22311806 ~ 22311888 (+) | True | trnal-uaa_2 |
| XR_004579671.1 | other | downstream | 1577781 | 22671625 ~ 22679550 (+) | False | LOC113530514 |
| TU307769 | other | downstream | 2277903 | 23371747 ~ 23383653 (+) | True | LOC117599309 |
