Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU306101 |
| length | 673 |
| RNA type | TUCP |
| GC content | 0.57 |
| exon number | 2 |
| gene id | si:ch73-290k24.5 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 21228320 ~ 21238999 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU306028 | lncRNA | upstream | 96267 | 21115050 ~ 21132053 (+) | True | G258459 |
| TU306031 | lncRNA | upstream | 120305 | 21107347 ~ 21108015 (+) | True | G258462 |
| TU306054 | lncRNA | upstream | 123219 | 21103714 ~ 21105101 (+) | True | G258483 |
| TU306047 | lncRNA | upstream | 134476 | 21093329 ~ 21093844 (+) | True | G258476 |
| TU306029 | lncRNA | upstream | 140098 | 21085382 ~ 21088222 (+) | True | G258460 |
| TU306264 | lncRNA | downstream | 123569 | 21354440 ~ 21354730 (+) | True | G258680 |
| TU306276 | lncRNA | downstream | 153420 | 21384291 ~ 21386101 (+) | True | G258689 |
| TU306345 | lncRNA | downstream | 248361 | 21479232 ~ 21496565 (+) | True | G258753 |
| TU306351 | lncRNA | downstream | 269107 | 21499978 ~ 21510994 (+) | True | G258758 |
| TU306346 | lncRNA | downstream | 321047 | 21551918 ~ 21556438 (+) | False | G258753 |
| XM_026921203.2 | mRNA | upstream | 577 | 21225341 ~ 21227743 (+) | True | egr4 |
| XM_026921015.2 | mRNA | upstream | 16056 | 21202490 ~ 21212264 (+) | True | LOC113530738 |
| XM_026920598.2 | mRNA | upstream | 56394 | 21138225 ~ 21171926 (+) | False | si:ch73-217b7.1 |
| XM_026920596.2 | mRNA | upstream | 56394 | 21143035 ~ 21171926 (+) | False | si:ch73-217b7.1 |
| XM_026920595.2 | mRNA | upstream | 56394 | 21143036 ~ 21171926 (+) | True | si:ch73-217b7.1 |
| XM_026920081.2 | mRNA | downstream | 11375 | 21242246 ~ 21257288 (+) | True | LOC113530257 |
| XM_034312205.1 | mRNA | downstream | 44559 | 21275430 ~ 21287608 (+) | False | LOC113530283 |
| XM_026920122.2 | mRNA | downstream | 44559 | 21275430 ~ 21287605 (+) | True | LOC113530283 |
| XM_026920123.2 | mRNA | downstream | 44559 | 21275430 ~ 21287605 (+) | False | LOC113530283 |
| XM_034311890.1 | mRNA | downstream | 79204 | 21310075 ~ 21312795 (+) | True | LOC117599257 |
| XR_004579743.1 | other | upstream | 321070 | 20903105 ~ 20907250 (+) | False | ubxn10 |
| TU305940 | other | upstream | 323247 | 20903147 ~ 20905073 (+) | False | ubxn10 |
| XR_003403172.2 | other | upstream | 714125 | 20510244 ~ 20514195 (+) | False | LOC113530729 |
| TU305571 | other | upstream | 829606 | 20390809 ~ 20398714 (+) | True | G258096 |
| TU304946 | other | upstream | 1749425 | 19478302 ~ 19478895 (+) | True | G257622 |
| TU306357 | other | downstream | 307383 | 21538254 ~ 21542254 (+) | False | LOC117599233 |
| trnal-uaa_2 | other | downstream | 1080935 | 22311806 ~ 22311888 (+) | True | trnal-uaa_2 |
| XR_004579671.1 | other | downstream | 1440754 | 22671625 ~ 22679550 (+) | False | LOC113530514 |
| TU307769 | other | downstream | 2140876 | 23371747 ~ 23383653 (+) | True | LOC117599309 |
| TU307771 | other | downstream | 2140876 | 23371747 ~ 23383653 (+) | False | LOC117599309 |
