Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU306176 |
| length | 336 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 3 |
| gene id | G258596 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 21153906 ~ 21167598 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU305999 | lncRNA | downstream | 177645 | 20973397 ~ 20976261 (-) | True | camk2n1b |
| TU305993 | lncRNA | downstream | 200054 | 20953626 ~ 20953852 (-) | True | G258437 |
| TU305980 | lncRNA | downstream | 251149 | 20901278 ~ 20902757 (-) | True | G258427 |
| TU305972 | lncRNA | downstream | 269811 | 20883799 ~ 20884095 (-) | True | G258424 |
| TU305953 | lncRNA | downstream | 377197 | 20776149 ~ 20776709 (-) | True | G258411 |
| TU306206 | lncRNA | upstream | 70438 | 21238036 ~ 21241060 (-) | True | G258626 |
| TU306265 | lncRNA | upstream | 186841 | 21354439 ~ 21354687 (-) | True | trnaq-uug_7 |
| TU306289 | lncRNA | upstream | 207300 | 21374898 ~ 21375103 (-) | True | G258700 |
| TU306366 | lncRNA | upstream | 347049 | 21514647 ~ 21555460 (-) | True | G258771 |
| XR_004579674.1 | lncRNA | upstream | 416117 | 21583715 ~ 21586639 (-) | True | LOC117599221 |
| XM_034311567.1 | mRNA | downstream | 21835 | 21114967 ~ 21132071 (-) | True | ppp1r14c |
| XM_026920855.2 | mRNA | downstream | 45980 | 21101697 ~ 21107926 (-) | True | iyd |
| XM_034311924.1 | mRNA | downstream | 52252 | 21085367 ~ 21101654 (-) | True | selenoi |
| XM_034311562.1 | mRNA | downstream | 69917 | 21074213 ~ 21083989 (-) | False | dnajc16 |
| XM_034311563.1 | mRNA | downstream | 69917 | 21074213 ~ 21083989 (-) | False | dnajc16 |
| XM_034311818.1 | mRNA | upstream | 8946 | 21176544 ~ 21179055 (-) | True | LOC117599250 |
| XM_026920601.2 | mRNA | upstream | 13449 | 21181047 ~ 21184109 (-) | True | LOC113530508 |
| XM_026920602.2 | mRNA | upstream | 21783 | 21189381 ~ 21191028 (-) | True | LOC113530510 |
| XM_026921016.2 | mRNA | upstream | 45315 | 21212913 ~ 21218913 (-) | True | LOC113530739 |
| XM_034312084.1 | mRNA | upstream | 91935 | 21259533 ~ 21273011 (-) | False | wu:fy63c09 |
| TU305957 | other | downstream | 285948 | 20830828 ~ 20867958 (-) | False | LOC117599256 |
| TU305550 | other | downstream | 881999 | 20252170 ~ 20271907 (-) | True | G258077 |
| XR_004579656.1 | other | downstream | 1033957 | 20110463 ~ 20119949 (-) | False | mlh3 |
| XR_003403201.2 | other | downstream | 1044696 | 20100999 ~ 20109210 (-) | True | kansl2 |
| TU306159 | other | upstream | 1388 | 21168986 ~ 21169698 (-) | True | G258580 |
| trnaq-uug_7 | other | upstream | 187028 | 21354626 ~ 21354697 (-) | False | trnaq-uug_7 |
| XR_004579748.1 | other | upstream | 761577 | 21929175 ~ 21954605 (-) | False | fyco1a |
| TU306971 | other | upstream | 1278432 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579695.1 | other | upstream | 2030984 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
