Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU306562 |
| length | 274 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G258942 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 21751405 ~ 21752452 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU306559 | lncRNA | downstream | 1404 | 21749791 ~ 21750001 (-) | True | G258940 |
| XR_003403152.2 | lncRNA | downstream | 152276 | 21588429 ~ 21599129 (-) | True | LOC113530427 |
| XR_004579674.1 | lncRNA | downstream | 164766 | 21583715 ~ 21586639 (-) | True | LOC117599221 |
| XR_004579673.1 | lncRNA | downstream | 165525 | 21583715 ~ 21585880 (-) | False | LOC117599221 |
| TU306366 | lncRNA | downstream | 195945 | 21514647 ~ 21555460 (-) | True | G258771 |
| TU306582 | lncRNA | upstream | 46384 | 21798836 ~ 21799244 (-) | True | G258961 |
| TU306588 | lncRNA | upstream | 52644 | 21805096 ~ 21806760 (-) | True | G258966 |
| TU306772 | lncRNA | upstream | 264034 | 22016486 ~ 22021151 (-) | False | cpeb2 |
| TU306775 | lncRNA | upstream | 278826 | 22031278 ~ 22035963 (-) | False | cpeb2 |
| TU306958 | lncRNA | upstream | 589409 | 22341861 ~ 22371089 (-) | True | G259294 |
| XM_026920092.2 | mRNA | downstream | 80053 | 21628132 ~ 21671352 (-) | True | LOC113530264 |
| XM_026920093.2 | mRNA | downstream | 80053 | 21631393 ~ 21671352 (-) | False | LOC113530264 |
| XM_034312021.1 | mRNA | downstream | 255350 | 21494416 ~ 21496055 (-) | True | LOC117599277 |
| XM_034311891.1 | mRNA | downstream | 276563 | 21472718 ~ 21474842 (-) | True | LOC117599258 |
| XM_026920132.2 | mRNA | downstream | 446777 | 21297056 ~ 21304628 (-) | True | ednrab |
| XM_026920917.2 | mRNA | upstream | 76813 | 21829265 ~ 21835197 (-) | True | ftr92 |
| XM_034312131.1 | mRNA | upstream | 105760 | 21858212 ~ 21883246 (-) | True | gpsm2l |
| XM_026920925.2 | mRNA | upstream | 132213 | 21884665 ~ 21921592 (-) | True | ghrhrl |
| XM_034312129.1 | mRNA | upstream | 172792 | 21925244 ~ 21954662 (-) | False | fyco1a |
| XM_034312130.1 | mRNA | upstream | 172792 | 21925244 ~ 21954641 (-) | False | fyco1a |
| trnaq-uug_7 | other | downstream | 396708 | 21354626 ~ 21354697 (-) | False | trnaq-uug_7 |
| TU306159 | other | downstream | 581707 | 21168986 ~ 21169698 (-) | True | G258580 |
| TU305957 | other | downstream | 883447 | 20830828 ~ 20867958 (-) | False | LOC117599256 |
| TU305550 | other | downstream | 1479498 | 20252170 ~ 20271907 (-) | True | G258077 |
| XR_004579656.1 | other | downstream | 1631456 | 20110463 ~ 20119949 (-) | False | mlh3 |
| XR_004579748.1 | other | upstream | 176723 | 21929175 ~ 21954605 (-) | False | fyco1a |
| TU306971 | other | upstream | 693578 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579695.1 | other | upstream | 1446130 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
| TU308180 | other | upstream | 2011222 | 23763674 ~ 23764163 (-) | True | G260310 |
| XR_004579755.1 | other | upstream | 2749281 | 24501733 ~ 24508467 (-) | False | tent5ab |
