Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU307254 |
| length | 575 |
| lncRNA type | inter_gene |
| GC content | 0.59 |
| exon number | 2 |
| gene id | G259540 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 23026446 ~ 23064569 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU307252 | lncRNA | upstream | 3998 | 23021970 ~ 23022448 (+) | True | G259539 |
| TU307249 | lncRNA | upstream | 10550 | 23013384 ~ 23015896 (+) | True | G259536 |
| TU307196 | lncRNA | upstream | 184707 | 22839217 ~ 22841739 (+) | True | G259498 |
| TU307080 | lncRNA | upstream | 440637 | 22584557 ~ 22585809 (+) | True | G259403 |
| TU306925 | lncRNA | upstream | 523541 | 22502687 ~ 22502905 (+) | True | G259268 |
| TU307418 | lncRNA | downstream | 212865 | 23277434 ~ 23277909 (+) | True | G259690 |
| TU307732 | lncRNA | downstream | 243186 | 23307755 ~ 23308592 (+) | True | G259962 |
| TU307742 | lncRNA | downstream | 268111 | 23332680 ~ 23335335 (+) | False | G259968 |
| TU307745 | lncRNA | downstream | 268111 | 23332680 ~ 23348937 (+) | True | G259968 |
| TU307756 | lncRNA | downstream | 280293 | 23344862 ~ 23362290 (+) | True | G259978 |
| XM_026920419.2 | mRNA | upstream | 14985 | 23006566 ~ 23011461 (+) | True | myl9a |
| XM_026920077.2 | mRNA | upstream | 74516 | 22859162 ~ 22951930 (+) | True | scube3 |
| XM_026920078.2 | mRNA | upstream | 74516 | 22859162 ~ 22951930 (+) | False | scube3 |
| XM_034312178.1 | mRNA | upstream | 175018 | 22835750 ~ 22851428 (+) | True | LOC113530963 |
| XM_026921398.2 | mRNA | downstream | 88035 | 23152604 ~ 23171751 (+) | True | si:dkey-65j6.2 |
| XM_034311676.1 | mRNA | downstream | 107688 | 23172257 ~ 23179323 (+) | False | tgm2a |
| XM_034311677.1 | mRNA | downstream | 108272 | 23172841 ~ 23179323 (+) | True | tgm2a |
| XM_026921432.2 | mRNA | downstream | 121922 | 23186491 ~ 23195255 (+) | True | tti1 |
| XM_026920165.2 | mRNA | downstream | 254792 | 23319361 ~ 23331266 (+) | True | znf341 |
| XR_004579671.1 | other | upstream | 346896 | 22671625 ~ 22679550 (+) | False | LOC113530514 |
| trnal-uaa_2 | other | upstream | 714558 | 22311806 ~ 22311888 (+) | True | trnal-uaa_2 |
| TU306357 | other | upstream | 1484192 | 21538254 ~ 21542254 (+) | False | LOC117599233 |
| TU306101 | other | upstream | 1795575 | 21228320 ~ 21230871 (+) | False | si:ch73-290k24.5 |
| TU305940 | other | upstream | 2121373 | 20903147 ~ 20905073 (+) | False | ubxn10 |
| TU307769 | other | downstream | 307178 | 23371747 ~ 23383653 (+) | True | LOC117599309 |
| TU307771 | other | downstream | 307178 | 23371747 ~ 23383653 (+) | False | LOC117599309 |
| TU307780 | other | downstream | 322969 | 23387538 ~ 23389314 (+) | True | G259993 |
| TU308306 | other | downstream | 967658 | 24032227 ~ 24032724 (+) | True | G260415 |
| TU308384 | other | downstream | 1204008 | 24268577 ~ 24269267 (+) | True | G260483 |
