Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU307563 |
| length | 1294 |
| lncRNA type | sense_over |
| GC content | 0.40 |
| exon number | 5 |
| gene id | si:ch73-217n20.1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 22961578 ~ 22980986 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU307467 | lncRNA | downstream | 181904 | 22742744 ~ 22787979 (-) | True | G259724 |
| TU307420 | lncRNA | downstream | 312954 | 22653338 ~ 22656929 (-) | True | G259692 |
| XR_004579704.1 | lncRNA | downstream | 500130 | 22467663 ~ 22469753 (-) | True | LOC117599239 |
| TU307005 | lncRNA | downstream | 545641 | 22422592 ~ 22424242 (-) | True | G259337 |
| TU306958 | lncRNA | downstream | 598794 | 22341861 ~ 22371089 (-) | True | G259294 |
| TU307564 | lncRNA | upstream | 33114 | 23006360 ~ 23010550 (-) | True | G259811 |
| TU307557 | lncRNA | upstream | 37603 | 23010849 ~ 23012362 (-) | True | G259809 |
| TU307566 | lncRNA | upstream | 44060 | 23017306 ~ 23018360 (-) | True | G259812 |
| TU307595 | lncRNA | upstream | 48115 | 23021361 ~ 23021570 (-) | True | G259838 |
| TU307596 | lncRNA | upstream | 49168 | 23022414 ~ 23022680 (-) | True | G259839 |
| XM_026921336.2 | mRNA | downstream | 147686 | 22813004 ~ 22822197 (-) | True | LOC113530928 |
| XM_026921337.2 | mRNA | downstream | 159262 | 22801924 ~ 22810621 (-) | True | LOC113530929 |
| XM_026921205.2 | mRNA | downstream | 207863 | 22758451 ~ 22762020 (-) | True | pdyn |
| XM_026921105.2 | mRNA | downstream | 228329 | 22733952 ~ 22741554 (-) | True | LOC113530789 |
| XM_026921134.2 | mRNA | downstream | 327594 | 22631289 ~ 22642289 (-) | True | LOC113530805 |
| XM_034312248.1 | mRNA | upstream | 13212 | 22986458 ~ 23004607 (-) | False | pfkfb2a |
| XM_034312250.1 | mRNA | upstream | 13212 | 22986458 ~ 23004604 (-) | False | pfkfb2a |
| XM_034312247.1 | mRNA | upstream | 13212 | 22986458 ~ 23004604 (-) | True | pfkfb2a |
| XM_026920929.2 | mRNA | upstream | 46484 | 23019730 ~ 23126956 (-) | False | dlgap4a |
| XM_034312154.1 | mRNA | upstream | 46484 | 23019730 ~ 23126956 (-) | False | dlgap4a |
| TU306971 | other | downstream | 520456 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579748.1 | other | downstream | 1015278 | 21929175 ~ 21954605 (-) | False | fyco1a |
| trnaq-uug_7 | other | downstream | 1615186 | 21354626 ~ 21354697 (-) | False | trnaq-uug_7 |
| TU306159 | other | downstream | 1800185 | 21168986 ~ 21169698 (-) | True | G258580 |
| TU305957 | other | downstream | 2101925 | 20830828 ~ 20867958 (-) | False | LOC117599256 |
| XR_004579695.1 | other | upstream | 225336 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
| TU308180 | other | upstream | 790428 | 23763674 ~ 23764163 (-) | True | G260310 |
| XR_004579755.1 | other | upstream | 1528487 | 24501733 ~ 24508467 (-) | False | tent5ab |
| TU308938 | other | upstream | 1532382 | 24505628 ~ 24508333 (-) | False | tent5ab |
| XR_004579701.1 | other | upstream | 1814444 | 24787690 ~ 24794897 (-) | False | si:ch1073-157b13.1 |
