Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU307595 |
| length | 210 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G259838 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 23021361 ~ 23021570 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU307566 | lncRNA | downstream | 3001 | 23017306 ~ 23018360 (-) | True | G259812 |
| TU307557 | lncRNA | downstream | 8999 | 23010849 ~ 23012362 (-) | True | G259809 |
| TU307564 | lncRNA | downstream | 10811 | 23006360 ~ 23010550 (-) | True | G259811 |
| TU307563 | lncRNA | downstream | 48115 | 22969883 ~ 22973246 (-) | False | si:ch73-217n20.1 |
| TU307467 | lncRNA | downstream | 233382 | 22742744 ~ 22787979 (-) | True | G259724 |
| TU307596 | lncRNA | upstream | 844 | 23022414 ~ 23022680 (-) | True | G259839 |
| TU307655 | lncRNA | upstream | 158812 | 23180382 ~ 23181592 (-) | True | G259897 |
| TU307824 | lncRNA | upstream | 287445 | 23309015 ~ 23309614 (-) | False | e2f1 |
| TU307833 | lncRNA | upstream | 294730 | 23316300 ~ 23317419 (-) | False | e2f1 |
| TU307828 | lncRNA | upstream | 311099 | 23332669 ~ 23335335 (-) | False | G260021 |
| XM_034312248.1 | mRNA | downstream | 16754 | 22986458 ~ 23004607 (-) | False | pfkfb2a |
| XM_034312250.1 | mRNA | downstream | 16757 | 22986458 ~ 23004604 (-) | False | pfkfb2a |
| XM_034312247.1 | mRNA | downstream | 16757 | 22986458 ~ 23004604 (-) | True | pfkfb2a |
| XM_034311897.1 | mRNA | downstream | 40375 | 22961578 ~ 22980986 (-) | True | si:ch73-217n20.1 |
| XM_026921336.2 | mRNA | downstream | 199164 | 22813004 ~ 22822197 (-) | True | LOC113530928 |
| XM_026921349.2 | mRNA | upstream | 160039 | 23181609 ~ 23186306 (-) | True | rprd1b |
| XM_034311678.1 | mRNA | upstream | 170687 | 23192257 ~ 23240347 (-) | False | LOC113530288 |
| XM_026920135.2 | mRNA | upstream | 177012 | 23198582 ~ 23240346 (-) | True | LOC113530288 |
| XM_026920910.2 | mRNA | upstream | 223159 | 23244729 ~ 23279510 (-) | True | ctnnbl1 |
| XM_034311580.1 | mRNA | upstream | 287329 | 23308899 ~ 23317464 (-) | True | e2f1 |
| TU306971 | other | downstream | 571934 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579748.1 | other | downstream | 1066756 | 21929175 ~ 21954605 (-) | False | fyco1a |
| trnaq-uug_7 | other | downstream | 1666664 | 21354626 ~ 21354697 (-) | False | trnaq-uug_7 |
| TU306159 | other | downstream | 1851663 | 21168986 ~ 21169698 (-) | True | G258580 |
| TU305957 | other | downstream | 2153403 | 20830828 ~ 20867958 (-) | False | LOC117599256 |
| XR_004579695.1 | other | upstream | 177012 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
| TU308180 | other | upstream | 742104 | 23763674 ~ 23764163 (-) | True | G260310 |
| XR_004579755.1 | other | upstream | 1480163 | 24501733 ~ 24508467 (-) | False | tent5ab |
| TU308938 | other | upstream | 1484058 | 24505628 ~ 24508333 (-) | False | tent5ab |
| XR_004579701.1 | other | upstream | 1766120 | 24787690 ~ 24794897 (-) | False | si:ch1073-157b13.1 |
