Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU307905 |
| length | 319 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 3 |
| gene id | G260083 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 23554596 ~ 23555077 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU307815 | lncRNA | upstream | 80152 | 23473913 ~ 23474444 (+) | True | G260011 |
| TU307813 | lncRNA | upstream | 85539 | 23468826 ~ 23469057 (+) | True | G260009 |
| TU307756 | lncRNA | upstream | 192306 | 23344862 ~ 23362290 (+) | True | G259978 |
| TU307745 | lncRNA | upstream | 205659 | 23332680 ~ 23348937 (+) | True | G259968 |
| TU307742 | lncRNA | upstream | 219261 | 23332680 ~ 23335335 (+) | False | G259968 |
| TU308085 | lncRNA | downstream | 271815 | 23826892 ~ 23827631 (+) | True | G260222 |
| TU308086 | lncRNA | downstream | 306565 | 23861642 ~ 23862570 (+) | True | G260223 |
| TU308080 | lncRNA | downstream | 312574 | 23867651 ~ 23869556 (+) | True | G260217 |
| TU308096 | lncRNA | downstream | 362804 | 23917881 ~ 23918391 (+) | True | G260232 |
| XR_004579726.1 | lncRNA | downstream | 447472 | 24002549 ~ 24003381 (+) | True | LOC117599261 |
| XM_026920292.2 | mRNA | upstream | 8523 | 23530494 ~ 23546073 (+) | True | otud4 |
| XM_026920293.2 | mRNA | upstream | 9740 | 23530494 ~ 23544856 (+) | False | otud4 |
| XM_026920291.2 | mRNA | upstream | 9740 | 23530495 ~ 23544856 (+) | False | otud4 |
| XM_026920296.2 | mRNA | upstream | 32781 | 23510617 ~ 23521815 (+) | True | slc10a7 |
| XM_026920295.2 | mRNA | upstream | 32781 | 23510619 ~ 23521815 (+) | False | slc10a7 |
| XM_026920110.2 | mRNA | downstream | 8468 | 23563545 ~ 23568673 (+) | True | anapc10 |
| XM_026921416.2 | mRNA | downstream | 17120 | 23572197 ~ 23583979 (+) | True | LOC113530971 |
| XM_026920687.2 | mRNA | downstream | 29702 | 23584779 ~ 23604485 (+) | True | LOC113530551 |
| XM_034311840.1 | mRNA | downstream | 50027 | 23605104 ~ 23617167 (+) | True | rnf150b |
| XM_026920685.2 | mRNA | downstream | 75516 | 23630593 ~ 23634770 (+) | True | si:ch211-149b19.2 |
| TU307780 | other | upstream | 165282 | 23387538 ~ 23389314 (+) | True | G259993 |
| TU307769 | other | upstream | 170943 | 23371747 ~ 23383653 (+) | True | LOC117599309 |
| TU307771 | other | upstream | 170943 | 23371747 ~ 23383653 (+) | False | LOC117599309 |
| XR_004579671.1 | other | upstream | 875046 | 22671625 ~ 22679550 (+) | False | LOC113530514 |
| trnal-uaa_2 | other | upstream | 1242708 | 22311806 ~ 22311888 (+) | True | trnal-uaa_2 |
| TU308306 | other | downstream | 477150 | 24032227 ~ 24032724 (+) | True | G260415 |
| TU308384 | other | downstream | 713500 | 24268577 ~ 24269267 (+) | True | G260483 |
| XR_004579660.1 | other | downstream | 1069860 | 24624937 ~ 24634545 (+) | False | ddx58 |
