Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU308180 |
| length | 463 |
| RNA type | TUCP |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G260310 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 23763674 ~ 23764163 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU307890 | lncRNA | downstream | 240966 | 23522215 ~ 23522708 (-) | True | G260071 |
| TU307874 | lncRNA | downstream | 289033 | 23474050 ~ 23474641 (-) | True | G260056 |
| TU307873 | lncRNA | downstream | 294601 | 23468801 ~ 23469073 (-) | True | G260055 |
| TU307828 | lncRNA | downstream | 428339 | 23332669 ~ 23335335 (-) | False | G260021 |
| TU307829 | lncRNA | downstream | 428339 | 23332669 ~ 23335335 (-) | False | G260021 |
| XR_004579700.1 | lncRNA | upstream | 104344 | 23868507 ~ 23872875 (-) | True | LOC117599235 |
| TU308245 | lncRNA | upstream | 110356 | 23874519 ~ 23875316 (-) | True | G260369 |
| TU308247 | lncRNA | upstream | 115924 | 23880087 ~ 23880328 (-) | True | G260371 |
| TU308266 | lncRNA | upstream | 210038 | 23974201 ~ 23975583 (-) | False | LOC113530810 |
| XR_004579699.1 | lncRNA | upstream | 372326 | 24136489 ~ 24140106 (-) | True | LOC117599232 |
| XM_026920908.2 | mRNA | downstream | 135296 | 23619534 ~ 23628378 (-) | True | LOC113530683 |
| XM_026920106.2 | mRNA | downstream | 201310 | 23556960 ~ 23562364 (-) | True | LOC113530272 |
| XM_026920107.2 | mRNA | downstream | 201310 | 23556961 ~ 23562364 (-) | False | LOC113530272 |
| XM_026920812.2 | mRNA | downstream | 207375 | 23547425 ~ 23556299 (-) | False | abce1 |
| XM_034311948.1 | mRNA | downstream | 207388 | 23547425 ~ 23556286 (-) | True | abce1 |
| XM_026921427.2 | mRNA | upstream | 41310 | 23805473 ~ 23808053 (-) | True | ccn1 |
| XM_034311921.1 | mRNA | upstream | 164153 | 23928316 ~ 23951638 (-) | False | wdr63 |
| XM_034311919.1 | mRNA | upstream | 164153 | 23928316 ~ 23951638 (-) | False | wdr63 |
| XM_034311920.1 | mRNA | upstream | 164153 | 23928316 ~ 23951638 (-) | True | wdr63 |
| XM_026921142.2 | mRNA | upstream | 209202 | 23973365 ~ 23979695 (-) | True | LOC113530810 |
| XR_004579695.1 | other | downstream | 523328 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
| TU306971 | other | downstream | 1314247 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579748.1 | other | downstream | 1809069 | 21929175 ~ 21954605 (-) | False | fyco1a |
| trnaq-uug_7 | other | downstream | 2408977 | 21354626 ~ 21354697 (-) | False | trnaq-uug_7 |
| TU306159 | other | downstream | 2593976 | 21168986 ~ 21169698 (-) | True | G258580 |
| XR_004579755.1 | other | upstream | 737570 | 24501733 ~ 24508467 (-) | False | tent5ab |
| TU308938 | other | upstream | 741465 | 24505628 ~ 24508333 (-) | False | tent5ab |
| XR_004579701.1 | other | upstream | 1023527 | 24787690 ~ 24794897 (-) | False | si:ch1073-157b13.1 |
| TU309105 | other | upstream | 1116795 | 24880958 ~ 24883145 (-) | True | G260947 |
| TU309088 | other | upstream | 1220296 | 24984459 ~ 24990531 (-) | False | si:ch211-149b19.4 |
