Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU308490 |
| length | 333 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G260548 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 24213334 ~ 24225958 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579699.1 | lncRNA | downstream | 73228 | 24136489 ~ 24140106 (-) | True | LOC117599232 |
| TU308266 | lncRNA | downstream | 237751 | 23974201 ~ 23975583 (-) | False | LOC113530810 |
| TU308247 | lncRNA | downstream | 333006 | 23880087 ~ 23880328 (-) | True | G260371 |
| TU308245 | lncRNA | downstream | 338018 | 23874519 ~ 23875316 (-) | True | G260369 |
| XR_004579700.1 | lncRNA | downstream | 340459 | 23868507 ~ 23872875 (-) | True | LOC117599235 |
| TU308500 | lncRNA | upstream | 76047 | 24302005 ~ 24316415 (-) | False | reps2 |
| TU308533 | lncRNA | upstream | 79271 | 24305229 ~ 24306670 (-) | True | G260581 |
| TU308888 | lncRNA | upstream | 124297 | 24350255 ~ 24435098 (-) | True | G260823 |
| TU308898 | lncRNA | upstream | 146098 | 24372056 ~ 24435869 (-) | False | G260823 |
| TU308915 | lncRNA | upstream | 156560 | 24382518 ~ 24383732 (-) | False | LOC113530517 |
| XM_026920671.2 | mRNA | downstream | 11162 | 24191180 ~ 24202172 (-) | True | LOC113530542 |
| XM_026921304.2 | mRNA | downstream | 49155 | 24161230 ~ 24164179 (-) | True | scp2b |
| XM_026921305.2 | mRNA | downstream | 49168 | 24161230 ~ 24164166 (-) | False | scp2b |
| XM_034311702.1 | mRNA | downstream | 58846 | 24140115 ~ 24154488 (-) | False | podn |
| XM_034311703.1 | mRNA | downstream | 58846 | 24140115 ~ 24154488 (-) | True | podn |
| XM_034311811.1 | mRNA | upstream | 47779 | 24273737 ~ 24315110 (-) | False | reps2 |
| XM_034311814.1 | mRNA | upstream | 47779 | 24273737 ~ 24295747 (-) | True | reps2 |
| XM_034311815.1 | mRNA | upstream | 47779 | 24273737 ~ 24295746 (-) | False | reps2 |
| XM_034311813.1 | mRNA | upstream | 47779 | 24273737 ~ 24295746 (-) | False | reps2 |
| XM_034311810.1 | mRNA | upstream | 47779 | 24273737 ~ 24295745 (-) | False | reps2 |
| TU308180 | other | downstream | 449171 | 23763674 ~ 23764163 (-) | True | G260310 |
| XR_004579695.1 | other | downstream | 972988 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
| TU306971 | other | downstream | 1763907 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579748.1 | other | downstream | 2258729 | 21929175 ~ 21954605 (-) | False | fyco1a |
| trnaq-uug_7 | other | downstream | 2858637 | 21354626 ~ 21354697 (-) | False | trnaq-uug_7 |
| XR_004579755.1 | other | upstream | 275775 | 24501733 ~ 24508467 (-) | False | tent5ab |
| TU308938 | other | upstream | 279670 | 24505628 ~ 24508333 (-) | False | tent5ab |
| XR_004579701.1 | other | upstream | 561732 | 24787690 ~ 24794897 (-) | False | si:ch1073-157b13.1 |
| TU309105 | other | upstream | 655000 | 24880958 ~ 24883145 (-) | True | G260947 |
| TU309088 | other | upstream | 758501 | 24984459 ~ 24990531 (-) | False | si:ch211-149b19.4 |
