Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU308680 |
| length | 757 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 3 |
| gene id | G260677 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 24616168 ~ 24617217 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU308609 | lncRNA | upstream | 12109 | 24528252 ~ 24604059 (+) | True | G260623 |
| TU308608 | lncRNA | upstream | 85348 | 24528252 ~ 24530820 (+) | False | G260623 |
| XR_004579724.1 | lncRNA | upstream | 87253 | 24523258 ~ 24528915 (+) | True | LOC117599259 |
| TU308624 | lncRNA | upstream | 136368 | 24477566 ~ 24479800 (+) | True | G260632 |
| TU308598 | lncRNA | upstream | 162658 | 24400584 ~ 24453510 (+) | False | rnf146 |
| XR_003403185.2 | lncRNA | downstream | 88070 | 24705287 ~ 24706115 (+) | True | LOC113530849 |
| TU308703 | lncRNA | downstream | 108630 | 24725847 ~ 24728397 (+) | True | G260691 |
| TU308704 | lncRNA | downstream | 108630 | 24725847 ~ 24728397 (+) | False | G260691 |
| XR_004579759.1 | lncRNA | downstream | 118506 | 24735723 ~ 24736373 (+) | True | LOC117599308 |
| TU308715 | lncRNA | downstream | 128564 | 24745781 ~ 24751808 (+) | False | G260697 |
| XM_034311609.1 | mRNA | upstream | 3079 | 24599158 ~ 24613089 (+) | True | LOC117599218 |
| XM_026920655.2 | mRNA | upstream | 87253 | 24520879 ~ 24528915 (+) | True | LOC113530532 |
| XM_026921357.2 | mRNA | upstream | 162630 | 24448602 ~ 24453538 (+) | True | rnf146 |
| XM_034311962.1 | mRNA | upstream | 162630 | 24449950 ~ 24453538 (+) | False | rnf146 |
| XM_026921041.2 | mRNA | upstream | 300701 | 24312226 ~ 24315467 (+) | True | mdp1 |
| XM_026920934.2 | mRNA | downstream | 1403 | 24618620 ~ 24623805 (+) | True | LOC113530697 |
| XM_034311590.1 | mRNA | downstream | 7720 | 24624937 ~ 24636129 (+) | True | ddx58 |
| XM_034312211.1 | mRNA | downstream | 63403 | 24680620 ~ 24689895 (+) | True | LOC113530267 |
| XM_026920325.2 | mRNA | downstream | 75814 | 24693031 ~ 24698433 (+) | False | aimp1b |
| XM_034311635.1 | mRNA | downstream | 75910 | 24693127 ~ 24698433 (+) | True | aimp1b |
| TU308384 | other | upstream | 346901 | 24268577 ~ 24269267 (+) | True | G260483 |
| TU308306 | other | upstream | 583444 | 24032227 ~ 24032724 (+) | True | G260415 |
| TU307780 | other | upstream | 1226854 | 23387538 ~ 23389314 (+) | True | G259993 |
| TU307769 | other | upstream | 1232515 | 23371747 ~ 23383653 (+) | True | LOC117599309 |
| XR_004579660.1 | other | downstream | 7720 | 24624937 ~ 24634545 (+) | False | ddx58 |
