Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU308800 |
| length | 533 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 3 |
| gene id | G260759 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 24936921 ~ 24983803 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU308765 | lncRNA | upstream | 1980 | 24919021 ~ 24934941 (+) | False | G260737 |
| TU308767 | lncRNA | upstream | 1980 | 24925784 ~ 24934941 (+) | True | G260737 |
| TU308784 | lncRNA | upstream | 12367 | 24914254 ~ 24924554 (+) | True | G260751 |
| TU308781 | lncRNA | upstream | 26458 | 24909719 ~ 24910463 (+) | True | G260748 |
| TU308751 | lncRNA | upstream | 97434 | 24838415 ~ 24839487 (+) | True | G260725 |
| TU308838 | lncRNA | downstream | 31417 | 25015220 ~ 25016939 (+) | True | G260796 |
| TU308839 | lncRNA | downstream | 31417 | 25015220 ~ 25016939 (+) | False | G260796 |
| TU308840 | lncRNA | downstream | 31417 | 25015220 ~ 25016939 (+) | False | G260796 |
| TU308862 | lncRNA | downstream | 63748 | 25047551 ~ 25053519 (+) | True | G260812 |
| TU308864 | lncRNA | downstream | 71345 | 25055148 ~ 25060232 (+) | True | G260813 |
| XM_034312118.1 | mRNA | upstream | 55281 | 24870669 ~ 24881640 (+) | True | zgc:56304 |
| XM_034311620.1 | mRNA | upstream | 68089 | 24856580 ~ 24868832 (+) | True | txk |
| XM_034311724.1 | mRNA | upstream | 110238 | 24809841 ~ 24826683 (+) | False | zgc:158659 |
| XM_034311594.1 | mRNA | downstream | 16142 | 24999945 ~ 25007817 (+) | True | LOC113525303 |
| XM_026911786.2 | mRNA | downstream | 18207 | 25002010 ~ 25007817 (+) | False | LOC113525303 |
| XM_034312226.1 | mRNA | downstream | 27293 | 25011096 ~ 25013271 (+) | True | LOC117599307 |
| XM_026911882.2 | mRNA | downstream | 59555 | 25043358 ~ 25046146 (+) | True | hmgb2b |
| XM_034312013.1 | mRNA | downstream | 86112 | 25069915 ~ 25072941 (+) | True | LOC117599273 |
| XR_004579660.1 | other | upstream | 302376 | 24624937 ~ 24634545 (+) | False | ddx58 |
| TU308384 | other | upstream | 667654 | 24268577 ~ 24269267 (+) | True | G260483 |
| TU308306 | other | upstream | 904197 | 24032227 ~ 24032724 (+) | True | G260415 |
| TU307780 | other | upstream | 1547607 | 23387538 ~ 23389314 (+) | True | G259993 |
| TU307771 | other | upstream | 1553268 | 23371747 ~ 23383653 (+) | False | LOC117599309 |
