Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU308915 |
| length | 340 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC113530517 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 24374273 ~ 24386255 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU308500 | lncRNA | downstream | 66103 | 24302005 ~ 24316415 (-) | False | reps2 |
| TU308533 | lncRNA | downstream | 75848 | 24305229 ~ 24306670 (-) | True | G260581 |
| TU308490 | lncRNA | downstream | 156560 | 24213334 ~ 24225958 (-) | True | G260548 |
| XR_004579699.1 | lncRNA | downstream | 242412 | 24136489 ~ 24140106 (-) | True | LOC117599232 |
| TU308266 | lncRNA | downstream | 406935 | 23974201 ~ 23975583 (-) | False | LOC113530810 |
| TU308907 | lncRNA | upstream | 3774 | 24387506 ~ 24409038 (-) | False | G260823 |
| TU308927 | lncRNA | upstream | 64826 | 24448558 ~ 24453499 (-) | True | G260833 |
| TU308924 | lncRNA | upstream | 66404 | 24450136 ~ 24453499 (-) | False | G260833 |
| TU308936 | lncRNA | upstream | 117397 | 24501129 ~ 24503863 (-) | False | tent5ab |
| XR_004579670.1 | lncRNA | upstream | 215379 | 24599111 ~ 24600250 (-) | True | LOC117599219 |
| XM_034311958.1 | mRNA | downstream | 11838 | 24351895 ~ 24370680 (-) | True | LOC113530519 |
| XM_034311584.1 | mRNA | downstream | 42355 | 24323615 ~ 24340163 (-) | False | LOC113530540 |
| XM_034311583.1 | mRNA | downstream | 42358 | 24321672 ~ 24340160 (-) | False | LOC113530540 |
| XM_034311582.1 | mRNA | downstream | 42358 | 24321672 ~ 24340160 (-) | True | LOC113530540 |
| XM_034311812.1 | mRNA | downstream | 87135 | 24273737 ~ 24295383 (-) | False | reps2 |
| XM_034311956.1 | mRNA | upstream | 4080 | 24387812 ~ 24447327 (-) | True | LOC117599267 |
| XM_034311961.1 | mRNA | upstream | 12397 | 24396129 ~ 24402716 (-) | True | LOC117599268 |
| XM_034311960.1 | mRNA | upstream | 39293 | 24423025 ~ 24429005 (-) | True | LOC113530518 |
| XM_026920905.2 | mRNA | upstream | 76795 | 24460527 ~ 24468085 (-) | False | LOC113530680 |
| XM_026920904.2 | mRNA | upstream | 76795 | 24460527 ~ 24467393 (-) | True | LOC113530680 |
| TU308180 | other | downstream | 618355 | 23763674 ~ 23764163 (-) | True | G260310 |
| XR_004579695.1 | other | downstream | 1142172 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
| TU306971 | other | downstream | 1933091 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579748.1 | other | downstream | 2427913 | 21929175 ~ 21954605 (-) | False | fyco1a |
| trnaq-uug_7 | other | downstream | 3027821 | 21354626 ~ 21354697 (-) | False | trnaq-uug_7 |
| XR_004579755.1 | other | upstream | 118001 | 24501733 ~ 24508467 (-) | False | tent5ab |
| TU308938 | other | upstream | 121896 | 24505628 ~ 24508333 (-) | False | tent5ab |
| XR_004579701.1 | other | upstream | 403958 | 24787690 ~ 24794897 (-) | False | si:ch1073-157b13.1 |
| TU309105 | other | upstream | 497226 | 24880958 ~ 24883145 (-) | True | G260947 |
| TU309088 | other | upstream | 600727 | 24984459 ~ 24990531 (-) | False | si:ch211-149b19.4 |
