Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU309005 |
| length | 282 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G260871 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 24697969 ~ 24698424 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309021 | lncRNA | downstream | 3723 | 24693335 ~ 24694246 (-) | True | G260885 |
| TU308974 | lncRNA | downstream | 79925 | 24616034 ~ 24618044 (-) | True | G260858 |
| XR_004579670.1 | lncRNA | downstream | 97719 | 24599111 ~ 24600250 (-) | True | LOC117599219 |
| TU308936 | lncRNA | downstream | 194106 | 24501129 ~ 24503863 (-) | False | tent5ab |
| TU308927 | lncRNA | downstream | 244470 | 24448558 ~ 24453499 (-) | True | G260833 |
| TU309033 | lncRNA | upstream | 25798 | 24724222 ~ 24725377 (-) | True | G260894 |
| TU309034 | lncRNA | upstream | 27426 | 24725850 ~ 24728369 (-) | True | G260895 |
| TU309036 | lncRNA | upstream | 31868 | 24730292 ~ 24730543 (-) | True | G260897 |
| TU309075 | lncRNA | upstream | 145603 | 24844027 ~ 24864890 (-) | True | G260921 |
| TU309098 | lncRNA | upstream | 172290 | 24870714 ~ 24873747 (-) | True | G260942 |
| XM_034311694.1 | mRNA | downstream | 52236 | 24638291 ~ 24645733 (-) | True | LOC113530806 |
| XM_026921135.2 | mRNA | downstream | 53197 | 24638291 ~ 24644772 (-) | False | LOC113530806 |
| XM_034311592.1 | mRNA | downstream | 100310 | 24592873 ~ 24597659 (-) | False | prelid1b |
| XM_034311591.1 | mRNA | downstream | 100310 | 24592873 ~ 24597659 (-) | True | prelid1b |
| XM_034311831.1 | mRNA | downstream | 126123 | 24537485 ~ 24571846 (-) | False | LOC113530539 |
| XM_026921207.2 | mRNA | upstream | 3956 | 24702380 ~ 24705329 (-) | True | LOC113530848 |
| XM_034311696.1 | mRNA | upstream | 3956 | 24702380 ~ 24703726 (-) | False | LOC113530848 |
| XM_026921395.2 | mRNA | upstream | 36190 | 24734614 ~ 24745225 (-) | True | cfi |
| XM_034312203.1 | mRNA | upstream | 47459 | 24745883 ~ 24765073 (-) | False | LOC113530579 |
| XM_034312202.1 | mRNA | upstream | 47459 | 24745883 ~ 24760695 (-) | True | LOC113530579 |
| XR_004579755.1 | other | downstream | 189502 | 24501733 ~ 24508467 (-) | False | tent5ab |
| TU308938 | other | downstream | 189636 | 24505628 ~ 24508333 (-) | False | tent5ab |
| TU308180 | other | downstream | 933806 | 23763674 ~ 23764163 (-) | True | G260310 |
| XR_004579695.1 | other | downstream | 1457623 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
| TU306971 | other | downstream | 2248542 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579701.1 | other | upstream | 89266 | 24787690 ~ 24794897 (-) | False | si:ch1073-157b13.1 |
| TU309105 | other | upstream | 182534 | 24880958 ~ 24883145 (-) | True | G260947 |
| TU309088 | other | upstream | 286035 | 24984459 ~ 24990531 (-) | False | si:ch211-149b19.4 |
| TU309124 | other | upstream | 292152 | 24990576 ~ 24999848 (-) | True | si:ch211-149b19.4 |
| TU309131 | other | upstream | 342367 | 25040791 ~ 25042595 (-) | True | G260972 |
