Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU309033 |
| length | 931 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 3 |
| gene id | G260894 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 24724222 ~ 24725377 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309007 | lncRNA | downstream | 23179 | 24681825 ~ 24701043 (-) | True | G260873 |
| TU309005 | lncRNA | downstream | 25798 | 24697969 ~ 24698424 (-) | True | G260871 |
| TU309021 | lncRNA | downstream | 29976 | 24693335 ~ 24694246 (-) | True | G260885 |
| TU308974 | lncRNA | downstream | 106178 | 24616034 ~ 24618044 (-) | True | G260858 |
| XR_004579670.1 | lncRNA | downstream | 123972 | 24599111 ~ 24600250 (-) | True | LOC117599219 |
| TU309034 | lncRNA | upstream | 473 | 24725850 ~ 24728369 (-) | True | G260895 |
| TU309036 | lncRNA | upstream | 4915 | 24730292 ~ 24730543 (-) | True | G260897 |
| TU309075 | lncRNA | upstream | 118650 | 24844027 ~ 24864890 (-) | True | G260921 |
| TU309098 | lncRNA | upstream | 145337 | 24870714 ~ 24873747 (-) | True | G260942 |
| TU309082 | lncRNA | upstream | 235679 | 24961056 ~ 24964895 (-) | False | nfxl1 |
| XM_026921207.2 | mRNA | downstream | 18893 | 24702380 ~ 24705329 (-) | True | LOC113530848 |
| XM_034311696.1 | mRNA | downstream | 20496 | 24702380 ~ 24703726 (-) | False | LOC113530848 |
| XM_034311694.1 | mRNA | downstream | 78489 | 24638291 ~ 24645733 (-) | True | LOC113530806 |
| XM_026921135.2 | mRNA | downstream | 79450 | 24638291 ~ 24644772 (-) | False | LOC113530806 |
| XM_034311592.1 | mRNA | downstream | 126563 | 24592873 ~ 24597659 (-) | False | prelid1b |
| XM_026921395.2 | mRNA | upstream | 9237 | 24734614 ~ 24745225 (-) | True | cfi |
| XM_034312203.1 | mRNA | upstream | 20506 | 24745883 ~ 24765073 (-) | False | LOC113530579 |
| XM_034312202.1 | mRNA | upstream | 20506 | 24745883 ~ 24760695 (-) | True | LOC113530579 |
| XM_034312218.1 | mRNA | upstream | 45883 | 24771260 ~ 24774653 (-) | True | LOC113530888 |
| XM_034312219.1 | mRNA | upstream | 49709 | 24775086 ~ 24782044 (-) | True | LOC117599302 |
| XR_004579755.1 | other | downstream | 215755 | 24501733 ~ 24508467 (-) | False | tent5ab |
| TU308938 | other | downstream | 215889 | 24505628 ~ 24508333 (-) | False | tent5ab |
| TU308180 | other | downstream | 960059 | 23763674 ~ 23764163 (-) | True | G260310 |
| XR_004579695.1 | other | downstream | 1483876 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
| TU306971 | other | downstream | 2274795 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579701.1 | other | upstream | 62313 | 24787690 ~ 24794897 (-) | False | si:ch1073-157b13.1 |
| TU309105 | other | upstream | 155581 | 24880958 ~ 24883145 (-) | True | G260947 |
| TU309088 | other | upstream | 259082 | 24984459 ~ 24990531 (-) | False | si:ch211-149b19.4 |
| TU309124 | other | upstream | 265199 | 24990576 ~ 24999848 (-) | True | si:ch211-149b19.4 |
| TU309131 | other | upstream | 315414 | 25040791 ~ 25042595 (-) | True | G260972 |
