Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU309036 |
| length | 252 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 1 |
| gene id | G260897 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 24730292 ~ 24730543 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309034 | lncRNA | downstream | 1923 | 24725850 ~ 24728369 (-) | True | G260895 |
| TU309033 | lncRNA | downstream | 4915 | 24724222 ~ 24725377 (-) | True | G260894 |
| TU309007 | lncRNA | downstream | 29249 | 24681825 ~ 24701043 (-) | True | G260873 |
| TU309005 | lncRNA | downstream | 31868 | 24697969 ~ 24698424 (-) | True | G260871 |
| TU309021 | lncRNA | downstream | 36046 | 24693335 ~ 24694246 (-) | True | G260885 |
| TU309075 | lncRNA | upstream | 113484 | 24844027 ~ 24864890 (-) | True | G260921 |
| TU309098 | lncRNA | upstream | 140171 | 24870714 ~ 24873747 (-) | True | G260942 |
| TU309082 | lncRNA | upstream | 230513 | 24961056 ~ 24964895 (-) | False | nfxl1 |
| TU309120 | lncRNA | upstream | 244172 | 24974715 ~ 24975307 (-) | True | G260962 |
| TU309132 | lncRNA | upstream | 311608 | 25042151 ~ 25042595 (-) | False | G260972 |
| XM_026921207.2 | mRNA | downstream | 24963 | 24702380 ~ 24705329 (-) | True | LOC113530848 |
| XM_034311696.1 | mRNA | downstream | 26566 | 24702380 ~ 24703726 (-) | False | LOC113530848 |
| XM_034311694.1 | mRNA | downstream | 84559 | 24638291 ~ 24645733 (-) | True | LOC113530806 |
| XM_026921135.2 | mRNA | downstream | 85520 | 24638291 ~ 24644772 (-) | False | LOC113530806 |
| XM_034311592.1 | mRNA | downstream | 132633 | 24592873 ~ 24597659 (-) | False | prelid1b |
| XM_026921395.2 | mRNA | upstream | 4071 | 24734614 ~ 24745225 (-) | True | cfi |
| XM_034312203.1 | mRNA | upstream | 15340 | 24745883 ~ 24765073 (-) | False | LOC113530579 |
| XM_034312202.1 | mRNA | upstream | 15340 | 24745883 ~ 24760695 (-) | True | LOC113530579 |
| XM_034312218.1 | mRNA | upstream | 40717 | 24771260 ~ 24774653 (-) | True | LOC113530888 |
| XM_034312219.1 | mRNA | upstream | 44543 | 24775086 ~ 24782044 (-) | True | LOC117599302 |
| XR_004579755.1 | other | downstream | 221825 | 24501733 ~ 24508467 (-) | False | tent5ab |
| TU308938 | other | downstream | 221959 | 24505628 ~ 24508333 (-) | False | tent5ab |
| TU308180 | other | downstream | 966129 | 23763674 ~ 23764163 (-) | True | G260310 |
| XR_004579695.1 | other | downstream | 1489946 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
| TU306971 | other | downstream | 2280865 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579701.1 | other | upstream | 57147 | 24787690 ~ 24794897 (-) | False | si:ch1073-157b13.1 |
| TU309105 | other | upstream | 150415 | 24880958 ~ 24883145 (-) | True | G260947 |
| TU309088 | other | upstream | 253916 | 24984459 ~ 24990531 (-) | False | si:ch211-149b19.4 |
| TU309124 | other | upstream | 260033 | 24990576 ~ 24999848 (-) | True | si:ch211-149b19.4 |
| TU309131 | other | upstream | 310248 | 25040791 ~ 25042595 (-) | True | G260972 |
