Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU309075 |
| length | 385 |
| lncRNA type | sense_over |
| GC content | 0.34 |
| exon number | 2 |
| gene id | G260921 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 24844027 ~ 24864890 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309036 | lncRNA | downstream | 113484 | 24730292 ~ 24730543 (-) | True | G260897 |
| TU309034 | lncRNA | downstream | 115658 | 24725850 ~ 24728369 (-) | True | G260895 |
| TU309033 | lncRNA | downstream | 118650 | 24724222 ~ 24725377 (-) | True | G260894 |
| TU309007 | lncRNA | downstream | 142984 | 24681825 ~ 24701043 (-) | True | G260873 |
| TU309098 | lncRNA | upstream | 5824 | 24870714 ~ 24873747 (-) | True | G260942 |
| TU309082 | lncRNA | upstream | 96166 | 24961056 ~ 24964895 (-) | False | nfxl1 |
| TU309120 | lncRNA | upstream | 109825 | 24974715 ~ 24975307 (-) | True | G260962 |
| TU309132 | lncRNA | upstream | 177261 | 25042151 ~ 25042595 (-) | False | G260972 |
| TU309081 | lncRNA | upstream | 178558 | 25043448 ~ 25046293 (-) | True | G260926 |
| XM_026911800.2 | mRNA | downstream | 7299 | 24828532 ~ 24836728 (-) | True | si:ch73-106g13.1 |
| XM_026921301.2 | mRNA | downstream | 48604 | 24789758 ~ 24795423 (-) | False | si:ch1073-157b13.1 |
| XM_034311728.1 | mRNA | downstream | 48675 | 24789758 ~ 24795352 (-) | False | si:ch1073-157b13.1 |
| XM_026921300.2 | mRNA | downstream | 49130 | 24789758 ~ 24794897 (-) | True | si:ch1073-157b13.1 |
| XM_026921302.2 | mRNA | downstream | 49136 | 24789758 ~ 24794891 (-) | False | si:ch1073-157b13.1 |
| XM_034311617.1 | mRNA | upstream | 23844 | 24888734 ~ 24898675 (-) | True | LOC113525311 |
| XM_034311619.1 | mRNA | upstream | 23844 | 24888734 ~ 24898045 (-) | False | LOC113525311 |
| XM_034312224.1 | mRNA | upstream | 57028 | 24921918 ~ 24929386 (-) | True | LOC117599306 |
| XM_034312000.1 | mRNA | upstream | 67694 | 24932584 ~ 24960018 (-) | False | corin |
| XM_034311999.1 | mRNA | upstream | 67694 | 24932584 ~ 24954015 (-) | False | corin |
| XR_004579701.1 | other | downstream | 49130 | 24787690 ~ 24794897 (-) | False | si:ch1073-157b13.1 |
| XR_004579755.1 | other | downstream | 335560 | 24501733 ~ 24508467 (-) | False | tent5ab |
| TU308938 | other | downstream | 335694 | 24505628 ~ 24508333 (-) | False | tent5ab |
| TU308180 | other | downstream | 1079864 | 23763674 ~ 23764163 (-) | True | G260310 |
| XR_004579695.1 | other | downstream | 1603681 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
| TU309105 | other | upstream | 16068 | 24880958 ~ 24883145 (-) | True | G260947 |
| TU309088 | other | upstream | 119569 | 24984459 ~ 24990531 (-) | False | si:ch211-149b19.4 |
| TU309124 | other | upstream | 125686 | 24990576 ~ 24999848 (-) | True | si:ch211-149b19.4 |
| TU309131 | other | upstream | 175901 | 25040791 ~ 25042595 (-) | True | G260972 |
| TU309138 | other | upstream | 211930 | 25076820 ~ 25079027 (-) | False | LOC117599229 |
