Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU309120 |
| length | 330 |
| lncRNA type | intronic |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G260962 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 24974715 ~ 24975307 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309082 | lncRNA | downstream | 9820 | 24961056 ~ 24964895 (-) | False | nfxl1 |
| TU309098 | lncRNA | downstream | 100968 | 24870714 ~ 24873747 (-) | True | G260942 |
| TU309075 | lncRNA | downstream | 109825 | 24844027 ~ 24864890 (-) | True | G260921 |
| TU309036 | lncRNA | downstream | 244172 | 24730292 ~ 24730543 (-) | True | G260897 |
| TU309034 | lncRNA | downstream | 246346 | 24725850 ~ 24728369 (-) | True | G260895 |
| TU309132 | lncRNA | upstream | 66844 | 25042151 ~ 25042595 (-) | False | G260972 |
| TU309081 | lncRNA | upstream | 68141 | 25043448 ~ 25046293 (-) | True | G260926 |
| TU309137 | lncRNA | upstream | 97404 | 25072711 ~ 25073088 (-) | True | G260976 |
| TU309140 | lncRNA | upstream | 113332 | 25088639 ~ 25089918 (-) | True | G260979 |
| XM_034312000.1 | mRNA | downstream | 14697 | 24932584 ~ 24960018 (-) | False | corin |
| XM_034311999.1 | mRNA | downstream | 20700 | 24932584 ~ 24954015 (-) | False | corin |
| XM_034312001.1 | mRNA | downstream | 24460 | 24932584 ~ 24950255 (-) | True | corin |
| XM_034312224.1 | mRNA | downstream | 45329 | 24921918 ~ 24929386 (-) | True | LOC117599306 |
| XM_034311617.1 | mRNA | downstream | 76040 | 24888734 ~ 24898675 (-) | True | LOC113525311 |
| XM_026911789.2 | mRNA | upstream | 2587 | 24977894 ~ 24982298 (-) | True | cnga1b |
| XM_034311595.1 | mRNA | upstream | 8672 | 24983979 ~ 25008193 (-) | False | si:ch211-149b19.4 |
| XM_034311597.1 | mRNA | upstream | 8672 | 24983979 ~ 25008186 (-) | False | si:ch211-149b19.4 |
| XM_034311596.1 | mRNA | upstream | 8672 | 24983979 ~ 24996680 (-) | False | si:ch211-149b19.4 |
| XM_034312192.1 | mRNA | upstream | 39905 | 25015212 ~ 25026090 (-) | True | tfr2 |
| TU309105 | other | downstream | 91570 | 24880958 ~ 24883145 (-) | True | G260947 |
| XR_004579701.1 | other | downstream | 179818 | 24787690 ~ 24794897 (-) | False | si:ch1073-157b13.1 |
| XR_004579755.1 | other | downstream | 466248 | 24501733 ~ 24508467 (-) | False | tent5ab |
| TU308938 | other | downstream | 466382 | 24505628 ~ 24508333 (-) | False | tent5ab |
| TU308180 | other | downstream | 1210552 | 23763674 ~ 23764163 (-) | True | G260310 |
| TU309088 | other | upstream | 9152 | 24984459 ~ 24990531 (-) | False | si:ch211-149b19.4 |
| TU309124 | other | upstream | 15269 | 24990576 ~ 24999848 (-) | True | si:ch211-149b19.4 |
| TU309131 | other | upstream | 65484 | 25040791 ~ 25042595 (-) | True | G260972 |
| TU309138 | other | upstream | 101513 | 25076820 ~ 25079027 (-) | False | LOC117599229 |
