Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU309132 |
| length | 323 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 2 |
| gene id | G260972 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 25040791 ~ 25042595 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309120 | lncRNA | downstream | 66844 | 24974715 ~ 24975307 (-) | True | G260962 |
| TU309082 | lncRNA | downstream | 77256 | 24961056 ~ 24964895 (-) | False | nfxl1 |
| TU309098 | lncRNA | downstream | 168404 | 24870714 ~ 24873747 (-) | True | G260942 |
| TU309075 | lncRNA | downstream | 177261 | 24844027 ~ 24864890 (-) | True | G260921 |
| TU309036 | lncRNA | downstream | 311608 | 24730292 ~ 24730543 (-) | True | G260897 |
| TU309081 | lncRNA | upstream | 853 | 25043448 ~ 25046293 (-) | True | G260926 |
| TU309137 | lncRNA | upstream | 30116 | 25072711 ~ 25073088 (-) | True | G260976 |
| TU309140 | lncRNA | upstream | 46044 | 25088639 ~ 25089918 (-) | True | G260979 |
| XM_034312227.1 | mRNA | downstream | 683 | 25028795 ~ 25041468 (-) | True | ctc1 |
| XM_034312192.1 | mRNA | downstream | 16061 | 25015212 ~ 25026090 (-) | True | tfr2 |
| XM_034311595.1 | mRNA | downstream | 33958 | 24983979 ~ 25008193 (-) | False | si:ch211-149b19.4 |
| XM_034311597.1 | mRNA | downstream | 33965 | 24983979 ~ 25008186 (-) | False | si:ch211-149b19.4 |
| XM_034311596.1 | mRNA | downstream | 45471 | 24983979 ~ 24996680 (-) | False | si:ch211-149b19.4 |
| XM_034312022.1 | mRNA | upstream | 5025 | 25047620 ~ 25053567 (-) | True | LOC117599278 |
| XM_034311547.1 | mRNA | upstream | 14323 | 25056918 ~ 25067948 (-) | True | sh3gl2b |
| XM_034311681.1 | mRNA | upstream | 34178 | 25076773 ~ 25079035 (-) | True | LOC117599229 |
| XM_034311593.1 | mRNA | upstream | 63113 | 25105708 ~ 25111538 (-) | True | LOC113525390 |
| TU309124 | other | downstream | 42303 | 24990576 ~ 24999848 (-) | True | si:ch211-149b19.4 |
| TU309088 | other | downstream | 51620 | 24984459 ~ 24990531 (-) | False | si:ch211-149b19.4 |
| TU309105 | other | downstream | 159006 | 24880958 ~ 24883145 (-) | True | G260947 |
| XR_004579701.1 | other | downstream | 247254 | 24787690 ~ 24794897 (-) | False | si:ch1073-157b13.1 |
| XR_004579755.1 | other | downstream | 533684 | 24501733 ~ 24508467 (-) | False | tent5ab |
| TU309138 | other | upstream | 34225 | 25076820 ~ 25079027 (-) | False | LOC117599229 |
