Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026920136.2 |
| length | 955 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 9 |
| gene id | commd7 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 12306153 ~ 12316352 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K22563 | COMMD7; COMM domain containing 7 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU300430 | lncRNA | downstream | 88409 | 12217424 ~ 12217744 (-) | True | G253749 |
| XR_003403159.2 | lncRNA | downstream | 155208 | 12143633 ~ 12150945 (-) | True | LOC113530483 |
| TU300415 | lncRNA | downstream | 155292 | 12143714 ~ 12150861 (-) | False | LOC113530483 |
| TU300190 | lncRNA | downstream | 401467 | 11904277 ~ 11904686 (-) | True | G253538 |
| TU300144 | lncRNA | downstream | 446807 | 11841041 ~ 11859346 (-) | False | LOC113530816 |
| TU300547 | lncRNA | upstream | 76011 | 12392363 ~ 12393653 (-) | True | G253843 |
| XR_003403193.2 | lncRNA | upstream | 290189 | 12606541 ~ 12607682 (-) | True | LOC113530910 |
| TU300710 | lncRNA | upstream | 344892 | 12661244 ~ 12709317 (-) | True | G253977 |
| XR_004579658.1 | lncRNA | upstream | 375993 | 12692345 ~ 12714075 (-) | True | LOC117599211 |
| TU300707 | lncRNA | upstream | 377267 | 12693619 ~ 12714080 (-) | False | LOC117599211 |
| XM_026920532.2 | mRNA | downstream | 20583 | 12187794 ~ 12285570 (-) | True | nol4lb |
| XM_026920535.2 | mRNA | downstream | 22441 | 12187794 ~ 12283712 (-) | False | nol4lb |
| XM_034311892.1 | mRNA | downstream | 23109 | 12187794 ~ 12283044 (-) | False | nol4lb |
| XM_026920536.2 | mRNA | downstream | 120375 | 12168527 ~ 12185778 (-) | True | zgc:194282 |
| XM_026920538.2 | mRNA | downstream | 138358 | 12155728 ~ 12167795 (-) | False | ptk6b |
| XM_034311983.1 | mRNA | upstream | 79092 | 12395444 ~ 12400748 (-) | True | ube2t |
| XM_034311984.1 | mRNA | upstream | 79155 | 12395507 ~ 12400748 (-) | False | ube2t |
| XM_026921387.2 | mRNA | upstream | 85113 | 12401465 ~ 12406721 (-) | False | zgc:194242 |
| XM_026921388.2 | mRNA | upstream | 85113 | 12401465 ~ 12406721 (-) | True | zgc:194242 |
| XM_026921130.2 | mRNA | upstream | 95722 | 12412074 ~ 12415966 (-) | False | LOC113530803 |
| TU300417 | other | downstream | 146793 | 12158772 ~ 12159360 (-) | False | ptk6b |
| trnae-cuc_33 | other | downstream | 164980 | 12141102 ~ 12141173 (-) | True | trnae-cuc_33 |
| XR_003403207.1 | other | downstream | 413151 | 11892927 ~ 11893002 (-) | True | LOC113530993 |
| XR_003403206.1 | other | downstream | 413733 | 11892348 ~ 11892420 (-) | True | LOC113530992 |
| TU300077 | other | downstream | 737623 | 11556887 ~ 11568530 (-) | False | avpr2ab |
| XR_004579685.1 | other | upstream | 1812864 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
| XR_004579686.1 | other | upstream | 1812864 | 14129216 ~ 14150581 (-) | False | LOC113530423 |
| XR_004579684.1 | other | upstream | 1812864 | 14129216 ~ 14150581 (-) | True | LOC113530423 |
| XR_004579687.1 | other | upstream | 1812864 | 14129216 ~ 14146831 (-) | False | LOC113530423 |
| TU301948 | other | upstream | 2382920 | 14699272 ~ 14704270 (-) | False | G255071 |
