Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026920248.2 |
| length | 1165 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 8 |
| gene id | LOC113530350 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 22245495 ~ 22252789 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| id | description |
|---|---|
| K01345 | CELA3; pancreatic endopeptidase E |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579757.1 | lncRNA | upstream | 14815 | 22227964 ~ 22230680 (+) | True | LOC117599300 |
| TU306766 | lncRNA | upstream | 94696 | 22148905 ~ 22150799 (+) | True | G259131 |
| TU306707 | lncRNA | upstream | 156744 | 22088182 ~ 22088751 (+) | True | G259078 |
| TU306730 | lncRNA | upstream | 197126 | 22047140 ~ 22048369 (+) | True | G259097 |
| TU306732 | lncRNA | upstream | 202437 | 22042779 ~ 22043058 (+) | True | G259099 |
| TU306924 | lncRNA | downstream | 227768 | 22480557 ~ 22481100 (+) | True | G259267 |
| TU306925 | lncRNA | downstream | 249898 | 22502687 ~ 22502905 (+) | True | G259268 |
| TU307080 | lncRNA | downstream | 331768 | 22584557 ~ 22585809 (+) | True | G259403 |
| TU307196 | lncRNA | downstream | 586428 | 22839217 ~ 22841739 (+) | True | G259498 |
| TU307249 | lncRNA | downstream | 760595 | 23013384 ~ 23015896 (+) | True | G259536 |
| XM_034311571.1 | mRNA | upstream | 96907 | 22098753 ~ 22148588 (+) | True | prdm5 |
| XM_034311572.1 | mRNA | upstream | 103156 | 22098886 ~ 22142339 (+) | False | prdm5 |
| XM_034311573.1 | mRNA | upstream | 115183 | 22098886 ~ 22130312 (+) | False | prdm5 |
| XM_034311574.1 | mRNA | upstream | 121784 | 22098753 ~ 22123711 (+) | False | prdm5 |
| XM_026921231.2 | mRNA | upstream | 158286 | 22070435 ~ 22087209 (+) | True | ndnf |
| XM_026921431.2 | mRNA | downstream | 16912 | 22269701 ~ 22276968 (+) | True | slc34a2b |
| XM_026920699.2 | mRNA | downstream | 54564 | 22307353 ~ 22308782 (+) | True | psmb11b |
| XM_034311736.1 | mRNA | downstream | 62383 | 22315172 ~ 22501652 (+) | True | utrn |
| XM_026921226.2 | mRNA | downstream | 390738 | 22643527 ~ 22656044 (+) | True | stxbp3 |
| XM_034311564.1 | mRNA | downstream | 405310 | 22658099 ~ 22667129 (+) | True | rabggta |
| TU306357 | other | upstream | 703241 | 21538254 ~ 21542254 (+) | False | LOC117599233 |
| TU306101 | other | upstream | 1014624 | 21228320 ~ 21230871 (+) | False | si:ch73-290k24.5 |
| XR_004579743.1 | other | upstream | 1338245 | 20903105 ~ 20907250 (+) | False | ubxn10 |
| TU305940 | other | upstream | 1340422 | 20903147 ~ 20905073 (+) | False | ubxn10 |
| XR_003403172.2 | other | upstream | 1731300 | 20510244 ~ 20514195 (+) | False | LOC113530729 |
| trnal-uaa_2 | other | downstream | 59017 | 22311806 ~ 22311888 (+) | True | trnal-uaa_2 |
| XR_004579671.1 | other | downstream | 418836 | 22671625 ~ 22679550 (+) | False | LOC113530514 |
| TU307769 | other | downstream | 1118958 | 23371747 ~ 23383653 (+) | True | LOC117599309 |
| TU307771 | other | downstream | 1118958 | 23371747 ~ 23383653 (+) | False | LOC117599309 |
| TU307780 | other | downstream | 1134749 | 23387538 ~ 23389314 (+) | True | G259993 |
