Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026920650.2 |
| length | 778 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 2 |
| gene id | taf13 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 10617926 ~ 10618814 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006366 | transcription by RNA polymerase II | biological_process |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU299104 | lncRNA | upstream | 76458 | 10541270 ~ 10541479 (+) | True | G252675 |
| TU299103 | lncRNA | upstream | 77281 | 10540447 ~ 10540656 (+) | True | G252674 |
| TU298798 | lncRNA | upstream | 451146 | 10166549 ~ 10166791 (+) | True | G252422 |
| TU298760 | lncRNA | upstream | 452682 | 10164708 ~ 10165255 (+) | True | G252389 |
| TU298668 | lncRNA | upstream | 616489 | 9998684 ~ 10001448 (+) | True | G252336 |
| TU299087 | lncRNA | downstream | 1835 | 10620649 ~ 10623909 (+) | True | G252665 |
| TU299090 | lncRNA | downstream | 1835 | 10620649 ~ 10633419 (+) | False | G252665 |
| TU299148 | lncRNA | downstream | 6038 | 10624852 ~ 10628804 (+) | True | LOC117599292 |
| XR_004579750.1 | lncRNA | downstream | 6041 | 10624855 ~ 10626624 (+) | False | LOC117599292 |
| TU299154 | lncRNA | downstream | 36993 | 10655807 ~ 10656025 (+) | True | G252720 |
| XM_034311760.1 | mRNA | upstream | 180280 | 10422931 ~ 10437657 (+) | False | znf362b |
| XM_026921265.2 | mRNA | upstream | 180280 | 10422932 ~ 10437657 (+) | True | znf362b |
| XM_026921264.2 | mRNA | upstream | 180280 | 10422932 ~ 10437657 (+) | False | znf362b |
| XM_026921263.2 | mRNA | upstream | 180280 | 10422933 ~ 10437657 (+) | False | znf362b |
| XM_026921178.2 | mRNA | upstream | 275509 | 10304773 ~ 10342428 (+) | False | kcnab2b |
| XM_034312143.1 | mRNA | downstream | 19952 | 10638766 ~ 10651923 (+) | True | si:rp71-17i16.5 |
| XM_034312144.1 | mRNA | downstream | 20018 | 10638832 ~ 10651923 (+) | False | si:rp71-17i16.5 |
| XM_034312145.1 | mRNA | downstream | 24496 | 10643310 ~ 10650015 (+) | False | si:rp71-17i16.5 |
| XM_026921065.2 | mRNA | downstream | 24499 | 10643313 ~ 10651923 (+) | False | si:rp71-17i16.5 |
| XM_026921066.2 | mRNA | downstream | 24500 | 10643314 ~ 10651923 (+) | False | si:rp71-17i16.5 |
| XR_004579736.1 | other | upstream | 278732 | 10292606 ~ 10339205 (+) | False | kcnab2b |
| TU297603 | other | upstream | 1992075 | 8621005 ~ 8625862 (+) | False | LOC113530359 |
| TU297540 | other | upstream | 2259837 | 8352789 ~ 8358100 (+) | False | spen |
| XR_004579705.1 | other | upstream | 2280438 | 8312773 ~ 8337499 (+) | False | atp13a2 |
| TU299368 | other | downstream | 230037 | 10848851 ~ 10851345 (+) | False | b4galt3 |
| XR_004579720.1 | other | downstream | 253215 | 10872029 ~ 10912533 (+) | False | atp2b3b |
| XR_003403205.1 | other | downstream | 377795 | 10996609 ~ 10996743 (+) | True | LOC113530991 |
| TU299671 | other | downstream | 612615 | 11231429 ~ 11237362 (+) | True | oard1 |
| trnah-gug_14 | other | downstream | 641033 | 11259847 ~ 11259918 (+) | True | trnah-gug_14 |
