Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026920690.2 |
| length | 846 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | LOC113530553 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 23483725 ~ 23486524 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko04974 | Protein digestion and absorption |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU307815 | lncRNA | upstream | 9281 | 23473913 ~ 23474444 (+) | True | G260011 |
| TU307813 | lncRNA | upstream | 14668 | 23468826 ~ 23469057 (+) | True | G260009 |
| TU307756 | lncRNA | upstream | 121435 | 23344862 ~ 23362290 (+) | True | G259978 |
| TU307745 | lncRNA | upstream | 134788 | 23332680 ~ 23348937 (+) | True | G259968 |
| TU307742 | lncRNA | upstream | 148390 | 23332680 ~ 23335335 (+) | False | G259968 |
| TU307893 | lncRNA | downstream | 40904 | 23527428 ~ 23562384 (+) | True | G260074 |
| TU307905 | lncRNA | downstream | 68072 | 23554596 ~ 23555077 (+) | True | G260083 |
| TU308085 | lncRNA | downstream | 340368 | 23826892 ~ 23827631 (+) | True | G260222 |
| TU308086 | lncRNA | downstream | 375118 | 23861642 ~ 23862570 (+) | True | G260223 |
| TU308080 | lncRNA | downstream | 381127 | 23867651 ~ 23869556 (+) | True | G260217 |
| XM_026920691.2 | mRNA | upstream | 2955 | 23477194 ~ 23480770 (+) | True | LOC113530554 |
| XM_026920351.2 | mRNA | upstream | 20119 | 23460595 ~ 23463606 (+) | True | LOC113530412 |
| XM_026921319.2 | mRNA | upstream | 33013 | 23447629 ~ 23450712 (+) | True | LOC113530919 |
| XM_034311581.1 | mRNA | upstream | 40100 | 23440496 ~ 23443625 (+) | True | LOC113530555 |
| XM_026921317.2 | mRNA | upstream | 50069 | 23422194 ~ 23433656 (+) | True | LOC113530918 |
| XM_026921419.2 | mRNA | downstream | 1986 | 23488510 ~ 23494390 (+) | True | LOC113530973 |
| XM_034311682.1 | mRNA | downstream | 18667 | 23505191 ~ 23506978 (+) | True | LOC117599230 |
| XM_034312172.1 | mRNA | downstream | 21015 | 23507539 ~ 23509653 (+) | True | LOC113530383 |
| XM_026920297.2 | mRNA | downstream | 24079 | 23510603 ~ 23517484 (+) | False | slc10a7 |
| XM_026920296.2 | mRNA | downstream | 24093 | 23510617 ~ 23521815 (+) | True | slc10a7 |
| TU307780 | other | upstream | 94411 | 23387538 ~ 23389314 (+) | True | G259993 |
| TU307769 | other | upstream | 100072 | 23371747 ~ 23383653 (+) | True | LOC117599309 |
| TU307771 | other | upstream | 100072 | 23371747 ~ 23383653 (+) | False | LOC117599309 |
| XR_004579671.1 | other | upstream | 804175 | 22671625 ~ 22679550 (+) | False | LOC113530514 |
| trnal-uaa_2 | other | upstream | 1171837 | 22311806 ~ 22311888 (+) | True | trnal-uaa_2 |
| TU308306 | other | downstream | 545703 | 24032227 ~ 24032724 (+) | True | G260415 |
| TU308384 | other | downstream | 782053 | 24268577 ~ 24269267 (+) | True | G260483 |
| XR_004579660.1 | other | downstream | 1138413 | 24624937 ~ 24634545 (+) | False | ddx58 |
