Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026920719.1 |
| length | 747 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 2 |
| gene id | LOC113530581 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 15519342 ~ 15540730 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU302439 | lncRNA | upstream | 64025 | 15454955 ~ 15455317 (+) | True | G255507 |
| TU302134 | lncRNA | upstream | 261607 | 15247697 ~ 15257735 (+) | True | G255227 |
| TU302136 | lncRNA | upstream | 280106 | 15229733 ~ 15239236 (+) | True | G255229 |
| XR_004579741.1 | lncRNA | upstream | 342120 | 15175584 ~ 15177222 (+) | True | LOC117599280 |
| TU302123 | lncRNA | upstream | 423723 | 15093813 ~ 15095619 (+) | True | G255218 |
| TU302592 | lncRNA | downstream | 71195 | 15611925 ~ 15623220 (+) | True | G255645 |
| TU302598 | lncRNA | downstream | 112116 | 15652846 ~ 15657627 (+) | True | G255649 |
| TU302599 | lncRNA | downstream | 117047 | 15657777 ~ 15658142 (+) | True | G255650 |
| TU302647 | lncRNA | downstream | 282558 | 15823288 ~ 15825384 (+) | False | LOC113530859 |
| XR_003403187.2 | lncRNA | downstream | 282559 | 15823289 ~ 15825452 (+) | True | LOC113530859 |
| XM_026920177.2 | mRNA | upstream | 113695 | 15399806 ~ 15405647 (+) | False | naa10 |
| XM_026920175.2 | mRNA | upstream | 113695 | 15400888 ~ 15405647 (+) | True | naa10 |
| XM_026920174.2 | mRNA | upstream | 113695 | 15401152 ~ 15405647 (+) | False | naa10 |
| XM_026920176.2 | mRNA | upstream | 113695 | 15401177 ~ 15405647 (+) | False | naa10 |
| XM_026920714.2 | mRNA | upstream | 128179 | 15364156 ~ 15391163 (+) | True | ddx23 |
| XM_026921436.2 | mRNA | downstream | 354913 | 15895643 ~ 15943003 (+) | True | prpf6 |
| XM_026920739.2 | mRNA | downstream | 436166 | 15976896 ~ 16034836 (+) | True | edem2 |
| XM_034311949.1 | mRNA | downstream | 436246 | 15976976 ~ 16034836 (+) | False | edem2 |
| XM_034311950.1 | mRNA | downstream | 459234 | 15999964 ~ 16034838 (+) | False | edem2 |
| XM_034311955.1 | mRNA | downstream | 518582 | 16059312 ~ 16173060 (+) | True | baz2a |
| TU302132 | other | upstream | 351674 | 15117112 ~ 15167668 (+) | False | rps21 |
| TU302131 | other | upstream | 399130 | 15117112 ~ 15120212 (+) | True | rps21 |
| TU301848 | other | upstream | 845390 | 14669804 ~ 14673952 (+) | False | G254991 |
| TU301849 | other | upstream | 845390 | 14669804 ~ 14673952 (+) | False | G254991 |
| TU301463 | other | upstream | 1447126 | 14070269 ~ 14072216 (+) | False | wfdc2 |
| XR_004579698.1 | other | downstream | 669920 | 16210650 ~ 16229406 (+) | False | LOC113530889 |
| XR_003403143.2 | other | downstream | 822819 | 16363549 ~ 16395000 (+) | False | LOC113530371 |
| TU302910 | other | downstream | 832512 | 16373242 ~ 16396212 (+) | False | LOC113530371 |
| TU303060 | other | downstream | 967295 | 16508025 ~ 16508380 (+) | True | G256046 |
| XR_004579712.1 | other | downstream | 1530406 | 17071136 ~ 17120941 (+) | False | itga5 |
