Item | Value |
---|---|
RNA id | XM_026920957.2 |
length | 507 |
RNA type | mRNA |
GC content | 0.48 |
exon number | 3 |
gene id | LOC113530713 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047610.1 |
NCBI id | CM018556.1 |
chromosome length | 25111544 |
location | 22742054 ~ 22744025 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | name | namespace |
---|---|---|
GO:0008152 | metabolic process | biological_process |
GO:0008250 | oligosaccharyltransferase complex | cellular_component |
GO:0016021 | integral component of membrane | cellular_component |
GO:0004579 | dolichyl-diphosphooligosaccharide-protein glycotransferase activity | molecular_function |
id | description |
---|---|
K12668 | OST2, DAD1; oligosaccharyltransferase complex subunit epsilon |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU307080 | lncRNA | upstream | 156245 | 22584557 ~ 22585809 (+) | True | G259403 |
TU306925 | lncRNA | upstream | 239149 | 22502687 ~ 22502905 (+) | True | G259268 |
TU306924 | lncRNA | upstream | 260954 | 22480557 ~ 22481100 (+) | True | G259267 |
XR_004579757.1 | lncRNA | upstream | 511374 | 22227964 ~ 22230680 (+) | True | LOC117599300 |
TU306766 | lncRNA | upstream | 591255 | 22148905 ~ 22150799 (+) | True | G259131 |
TU307196 | lncRNA | downstream | 95192 | 22839217 ~ 22841739 (+) | True | G259498 |
TU307249 | lncRNA | downstream | 269359 | 23013384 ~ 23015896 (+) | True | G259536 |
TU307252 | lncRNA | downstream | 277945 | 23021970 ~ 23022448 (+) | True | G259539 |
TU307254 | lncRNA | downstream | 282421 | 23026446 ~ 23064569 (+) | True | G259540 |
TU307418 | lncRNA | downstream | 533409 | 23277434 ~ 23277909 (+) | True | G259690 |
XM_026921103.2 | mRNA | upstream | 7031 | 22721758 ~ 22735023 (+) | True | LOC113530788 |
XM_026920613.2 | mRNA | upstream | 25908 | 22709993 ~ 22716146 (+) | True | LOC113530513 |
XM_034311614.1 | mRNA | upstream | 43150 | 22693240 ~ 22698904 (+) | True | LOC117595661 |
XM_034311612.1 | mRNA | upstream | 61512 | 22671627 ~ 22680542 (+) | True | LOC113530514 |
XM_034311613.1 | mRNA | upstream | 62031 | 22671398 ~ 22680023 (+) | False | LOC113530514 |
XM_026921443.2 | mRNA | downstream | 1041 | 22745066 ~ 22755933 (+) | True | gmeb2 |
XM_026921444.2 | mRNA | downstream | 1047 | 22745072 ~ 22755933 (+) | False | gmeb2 |
XM_026921253.2 | mRNA | downstream | 31706 | 22775731 ~ 22783461 (+) | True | stk35 |
XM_026921401.2 | mRNA | downstream | 90497 | 22834522 ~ 22851428 (+) | False | LOC113530963 |
XM_026921402.2 | mRNA | downstream | 90497 | 22834522 ~ 22851428 (+) | False | LOC113530963 |
XR_004579671.1 | other | upstream | 62504 | 22671625 ~ 22679550 (+) | False | LOC113530514 |
trnal-uaa_2 | other | upstream | 430166 | 22311806 ~ 22311888 (+) | True | trnal-uaa_2 |
TU306357 | other | upstream | 1199800 | 21538254 ~ 21542254 (+) | False | LOC117599233 |
TU306101 | other | upstream | 1511183 | 21228320 ~ 21230871 (+) | False | si:ch73-290k24.5 |
TU305940 | other | upstream | 1836981 | 20903147 ~ 20905073 (+) | False | ubxn10 |
TU307769 | other | downstream | 627722 | 23371747 ~ 23383653 (+) | True | LOC117599309 |
TU307771 | other | downstream | 627722 | 23371747 ~ 23383653 (+) | False | LOC117599309 |
TU307780 | other | downstream | 643513 | 23387538 ~ 23389314 (+) | True | G259993 |
TU308306 | other | downstream | 1288202 | 24032227 ~ 24032724 (+) | True | G260415 |
TU308384 | other | downstream | 1524552 | 24268577 ~ 24269267 (+) | True | G260483 |