Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034311705.1 |
| length | 1041 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 6 |
| gene id | emp3b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 11438049 ~ 11444255 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU299972 | lncRNA | downstream | 73635 | 11362972 ~ 11364414 (-) | True | G253384 |
| TU299973 | lncRNA | downstream | 76464 | 11359515 ~ 11361585 (-) | True | G253385 |
| TU299971 | lncRNA | downstream | 83832 | 11353502 ~ 11354217 (-) | True | G253383 |
| TU299705 | lncRNA | downstream | 172900 | 11264909 ~ 11265149 (-) | True | G253174 |
| TU299539 | lncRNA | downstream | 346714 | 11089077 ~ 11091335 (-) | False | LOC113530615 |
| XR_003403134.2 | lncRNA | upstream | 12092 | 11456020 ~ 11462531 (-) | False | LOC113530309 |
| XR_003403133.2 | lncRNA | upstream | 12092 | 11456020 ~ 11462531 (-) | False | LOC113530309 |
| TU300067 | lncRNA | upstream | 86776 | 11530704 ~ 11533297 (-) | True | G253444 |
| TU300066 | lncRNA | upstream | 88346 | 11532274 ~ 11533297 (-) | False | G253444 |
| TU300041 | lncRNA | upstream | 96253 | 11540181 ~ 11542479 (-) | True | G253430 |
| XM_026921201.2 | mRNA | downstream | 61489 | 11372242 ~ 11376560 (-) | False | LOC113530844 |
| XM_026921202.2 | mRNA | downstream | 61640 | 11372242 ~ 11376409 (-) | True | LOC113530844 |
| XM_026920307.2 | mRNA | downstream | 160928 | 11274090 ~ 11277121 (-) | False | fkbpl |
| XM_026920457.2 | mRNA | upstream | 105466 | 11549394 ~ 11568603 (-) | False | avpr2ab |
| XM_026920456.2 | mRNA | upstream | 105466 | 11549394 ~ 11568602 (-) | True | avpr2ab |
| XM_026921204.2 | mRNA | upstream | 143777 | 11587705 ~ 11598386 (-) | True | LOC113530846 |
| XM_034312010.1 | mRNA | upstream | 273901 | 11717829 ~ 11725337 (-) | False | LOC113530831 |
| XM_026921182.2 | mRNA | upstream | 273901 | 11717829 ~ 11725337 (-) | False | LOC113530831 |
| trnan-guu_24 | other | downstream | 164646 | 11273330 ~ 11273403 (-) | True | trnan-guu_24 |
| trnae-uuc_4 | other | downstream | 178935 | 11259043 ~ 11259114 (-) | True | trnae-uuc_4 |
| TU299470 | other | downstream | 422419 | 11013964 ~ 11015630 (-) | False | LOC113530950 |
| TU299234 | other | downstream | 799331 | 10636523 ~ 10638718 (-) | False | sinup |
| XR_003403171.2 | other | downstream | 968515 | 10460694 ~ 10469534 (-) | False | usp21 |
| TU299993 | other | upstream | 12093 | 11456021 ~ 11462706 (-) | False | LOC113530309 |
| TU299994 | other | upstream | 12093 | 11456021 ~ 11462706 (-) | True | LOC113530309 |
| TU300077 | other | upstream | 112959 | 11556887 ~ 11568530 (-) | False | avpr2ab |
| XR_003403206.1 | other | upstream | 448420 | 11892348 ~ 11892420 (-) | True | LOC113530992 |
| XR_003403207.1 | other | upstream | 448999 | 11892927 ~ 11893002 (-) | True | LOC113530993 |
