Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026921202.2 |
| length | 1122 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 5 |
| gene id | LOC113530844 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 11372242 ~ 11376560 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:1902600 | proton transmembrane transport | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU299972 | lncRNA | downstream | 7828 | 11362972 ~ 11364414 (-) | True | G253384 |
| TU299973 | lncRNA | downstream | 10657 | 11359515 ~ 11361585 (-) | True | G253385 |
| TU299971 | lncRNA | downstream | 18025 | 11353502 ~ 11354217 (-) | True | G253383 |
| TU299705 | lncRNA | downstream | 107093 | 11264909 ~ 11265149 (-) | True | G253174 |
| TU299539 | lncRNA | downstream | 280907 | 11089077 ~ 11091335 (-) | False | LOC113530615 |
| XR_003403134.2 | lncRNA | upstream | 79611 | 11456020 ~ 11462531 (-) | False | LOC113530309 |
| XR_003403133.2 | lncRNA | upstream | 79611 | 11456020 ~ 11462531 (-) | False | LOC113530309 |
| TU300067 | lncRNA | upstream | 154295 | 11530704 ~ 11533297 (-) | True | G253444 |
| TU300066 | lncRNA | upstream | 155865 | 11532274 ~ 11533297 (-) | False | G253444 |
| TU300041 | lncRNA | upstream | 163772 | 11540181 ~ 11542479 (-) | True | G253430 |
| XM_026920309.2 | mRNA | downstream | 94566 | 11274090 ~ 11277676 (-) | False | fkbpl |
| XM_026920307.2 | mRNA | downstream | 95121 | 11274090 ~ 11277121 (-) | False | fkbpl |
| XM_026920306.2 | mRNA | downstream | 95123 | 11274090 ~ 11277119 (-) | True | fkbpl |
| XM_026920308.2 | mRNA | downstream | 95125 | 11274090 ~ 11277117 (-) | False | fkbpl |
| XM_034311599.1 | mRNA | downstream | 95125 | 11274090 ~ 11277117 (-) | False | fkbpl |
| XM_034311706.1 | mRNA | upstream | 61640 | 11438049 ~ 11444255 (-) | False | emp3b |
| XM_026921110.2 | mRNA | upstream | 61640 | 11438049 ~ 11443931 (-) | False | emp3b |
| XM_034311707.1 | mRNA | upstream | 61640 | 11438049 ~ 11443930 (-) | False | emp3b |
| XM_034311705.1 | mRNA | upstream | 61640 | 11438049 ~ 11443928 (-) | False | emp3b |
| XM_026921109.2 | mRNA | upstream | 61640 | 11438049 ~ 11442443 (-) | True | emp3b |
| trnan-guu_24 | other | downstream | 98839 | 11273330 ~ 11273403 (-) | True | trnan-guu_24 |
| trnae-uuc_4 | other | downstream | 113128 | 11259043 ~ 11259114 (-) | True | trnae-uuc_4 |
| TU299470 | other | downstream | 356612 | 11013964 ~ 11015630 (-) | False | LOC113530950 |
| TU299234 | other | downstream | 733524 | 10636523 ~ 10638718 (-) | False | sinup |
| XR_003403171.2 | other | downstream | 902708 | 10460694 ~ 10469534 (-) | False | usp21 |
| TU299993 | other | upstream | 79612 | 11456021 ~ 11462706 (-) | False | LOC113530309 |
| TU299994 | other | upstream | 79612 | 11456021 ~ 11462706 (-) | True | LOC113530309 |
| TU300077 | other | upstream | 180478 | 11556887 ~ 11568530 (-) | False | avpr2ab |
| XR_003403206.1 | other | upstream | 515939 | 11892348 ~ 11892420 (-) | True | LOC113530992 |
| XR_003403207.1 | other | upstream | 516518 | 11892927 ~ 11893002 (-) | True | LOC113530993 |
