Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034311598.1 |
| length | 563 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | LOC113530556 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 23407809 ~ 23411399 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU307756 | lncRNA | upstream | 45519 | 23344862 ~ 23362290 (+) | True | G259978 |
| TU307745 | lncRNA | upstream | 58872 | 23332680 ~ 23348937 (+) | True | G259968 |
| TU307742 | lncRNA | upstream | 72474 | 23332680 ~ 23335335 (+) | False | G259968 |
| TU307732 | lncRNA | upstream | 99217 | 23307755 ~ 23308592 (+) | True | G259962 |
| TU307418 | lncRNA | upstream | 129900 | 23277434 ~ 23277909 (+) | True | G259690 |
| TU307813 | lncRNA | downstream | 57427 | 23468826 ~ 23469057 (+) | True | G260009 |
| TU307815 | lncRNA | downstream | 62514 | 23473913 ~ 23474444 (+) | True | G260011 |
| TU307893 | lncRNA | downstream | 116029 | 23527428 ~ 23562384 (+) | True | G260074 |
| TU307905 | lncRNA | downstream | 143197 | 23554596 ~ 23555077 (+) | True | G260083 |
| TU308085 | lncRNA | downstream | 415493 | 23826892 ~ 23827631 (+) | True | G260222 |
| XM_034312230.1 | mRNA | upstream | 32066 | 23371744 ~ 23375743 (+) | False | LOC117599309 |
| XM_026920165.2 | mRNA | upstream | 76543 | 23319361 ~ 23331266 (+) | True | znf341 |
| XM_026920166.2 | mRNA | upstream | 76543 | 23319361 ~ 23331266 (+) | False | znf341 |
| XM_026921432.2 | mRNA | upstream | 212554 | 23186491 ~ 23195255 (+) | True | tti1 |
| XM_034311676.1 | mRNA | upstream | 228486 | 23172257 ~ 23179323 (+) | False | tgm2a |
| XM_026921236.2 | mRNA | downstream | 3418 | 23414817 ~ 23421228 (+) | True | LOC113530872 |
| XM_026921317.2 | mRNA | downstream | 10795 | 23422194 ~ 23433656 (+) | True | LOC113530918 |
| XM_034311581.1 | mRNA | downstream | 29097 | 23440496 ~ 23443625 (+) | True | LOC113530555 |
| XM_026921319.2 | mRNA | downstream | 36230 | 23447629 ~ 23450712 (+) | True | LOC113530919 |
| XM_026920351.2 | mRNA | downstream | 49196 | 23460595 ~ 23463606 (+) | True | LOC113530412 |
| TU307780 | other | upstream | 18495 | 23387538 ~ 23389314 (+) | True | G259993 |
| TU307769 | other | upstream | 24156 | 23371747 ~ 23383653 (+) | True | LOC117599309 |
| TU307771 | other | upstream | 24156 | 23371747 ~ 23383653 (+) | False | LOC117599309 |
| XR_004579671.1 | other | upstream | 728259 | 22671625 ~ 22679550 (+) | False | LOC113530514 |
| trnal-uaa_2 | other | upstream | 1095921 | 22311806 ~ 22311888 (+) | True | trnal-uaa_2 |
| TU308306 | other | downstream | 620828 | 24032227 ~ 24032724 (+) | True | G260415 |
| TU308384 | other | downstream | 857178 | 24268577 ~ 24269267 (+) | True | G260483 |
| XR_004579660.1 | other | downstream | 1213538 | 24624937 ~ 24634545 (+) | False | ddx58 |
