Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034311687.1 |
| length | 855 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 5 |
| gene id | LOC113530415 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 23393672 ~ 23395815 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU307828 | lncRNA | downstream | 58337 | 23332669 ~ 23335335 (-) | False | G260021 |
| TU307829 | lncRNA | downstream | 58337 | 23332669 ~ 23335335 (-) | False | G260021 |
| TU307830 | lncRNA | downstream | 58337 | 23332669 ~ 23335335 (-) | True | G260021 |
| TU307833 | lncRNA | downstream | 76253 | 23316300 ~ 23317419 (-) | False | e2f1 |
| TU307824 | lncRNA | downstream | 84058 | 23309015 ~ 23309614 (-) | False | e2f1 |
| TU307873 | lncRNA | upstream | 72986 | 23468801 ~ 23469073 (-) | True | G260055 |
| TU307874 | lncRNA | upstream | 78235 | 23474050 ~ 23474641 (-) | True | G260056 |
| TU307890 | lncRNA | upstream | 126400 | 23522215 ~ 23522708 (-) | True | G260071 |
| XR_004579700.1 | lncRNA | upstream | 472692 | 23868507 ~ 23872875 (-) | True | LOC117599235 |
| TU308245 | lncRNA | upstream | 478704 | 23874519 ~ 23875316 (-) | True | G260369 |
| XM_034311749.1 | mRNA | downstream | 34408 | 23331249 ~ 23359264 (-) | True | itchb |
| XM_034311580.1 | mRNA | downstream | 76208 | 23308899 ~ 23317464 (-) | True | e2f1 |
| XM_026920910.2 | mRNA | downstream | 114162 | 23244729 ~ 23279510 (-) | True | ctnnbl1 |
| XM_034311678.1 | mRNA | downstream | 153325 | 23192257 ~ 23240347 (-) | False | LOC113530288 |
| XM_026920135.2 | mRNA | downstream | 153326 | 23198582 ~ 23240346 (-) | True | LOC113530288 |
| XM_034311899.1 | mRNA | upstream | 127598 | 23523413 ~ 23527413 (-) | True | LOC113530552 |
| XM_026920812.2 | mRNA | upstream | 151610 | 23547425 ~ 23556299 (-) | False | abce1 |
| XM_034311948.1 | mRNA | upstream | 151610 | 23547425 ~ 23556286 (-) | True | abce1 |
| XM_026920106.2 | mRNA | upstream | 161145 | 23556960 ~ 23562364 (-) | True | LOC113530272 |
| XM_026920107.2 | mRNA | upstream | 161146 | 23556961 ~ 23562364 (-) | False | LOC113530272 |
| XR_004579695.1 | other | downstream | 153326 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
| TU306971 | other | downstream | 944245 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579748.1 | other | downstream | 1439067 | 21929175 ~ 21954605 (-) | False | fyco1a |
| trnaq-uug_7 | other | downstream | 2038975 | 21354626 ~ 21354697 (-) | False | trnaq-uug_7 |
| TU306159 | other | downstream | 2223974 | 21168986 ~ 21169698 (-) | True | G258580 |
| TU308180 | other | upstream | 367859 | 23763674 ~ 23764163 (-) | True | G260310 |
| XR_004579755.1 | other | upstream | 1105918 | 24501733 ~ 24508467 (-) | False | tent5ab |
| TU308938 | other | upstream | 1109813 | 24505628 ~ 24508333 (-) | False | tent5ab |
| XR_004579701.1 | other | upstream | 1391875 | 24787690 ~ 24794897 (-) | False | si:ch1073-157b13.1 |
| TU309105 | other | upstream | 1485143 | 24880958 ~ 24883145 (-) | True | G260947 |
