Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034311882.1 |
| length | 852 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 6 |
| gene id | LOC117595686 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 18565524 ~ 18607418 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU304084 | lncRNA | downstream | 215832 | 18348843 ~ 18349692 (-) | True | G256929 |
| TU304027 | lncRNA | downstream | 279433 | 18285815 ~ 18286091 (-) | False | znf217 |
| TU303854 | lncRNA | downstream | 679945 | 17884243 ~ 17885579 (-) | False | kcng1 |
| TU303780 | lncRNA | downstream | 774617 | 17790641 ~ 17790907 (-) | True | G256689 |
| TU303706 | lncRNA | downstream | 831475 | 17733806 ~ 17734049 (-) | True | G256623 |
| TU304576 | lncRNA | upstream | 45675 | 18653093 ~ 18653315 (-) | True | G257322 |
| TU304681 | lncRNA | upstream | 201645 | 18809063 ~ 18860788 (-) | True | LOC113530357 |
| TU304682 | lncRNA | upstream | 201645 | 18809063 ~ 18852217 (-) | False | LOC113530357 |
| TU304683 | lncRNA | upstream | 201645 | 18809063 ~ 18863122 (-) | False | LOC113530357 |
| XR_003403141.2 | lncRNA | upstream | 236657 | 18844075 ~ 18852165 (-) | False | LOC113530357 |
| XM_026921196.2 | mRNA | downstream | 34272 | 18509148 ~ 18531252 (-) | False | LOC113530839 |
| XM_026921195.2 | mRNA | downstream | 34272 | 18509148 ~ 18531252 (-) | True | LOC113530839 |
| XM_026920075.2 | mRNA | downstream | 63713 | 18500181 ~ 18501811 (-) | True | irx7 |
| XM_026920120.2 | mRNA | downstream | 87725 | 18440875 ~ 18477799 (-) | True | LOC113530281 |
| XM_026920121.2 | mRNA | downstream | 130538 | 18425365 ~ 18434986 (-) | True | cbln4 |
| XM_026920149.2 | mRNA | upstream | 49677 | 18657095 ~ 18675212 (-) | True | avpr2aa |
| XM_026920788.2 | mRNA | upstream | 85989 | 18693407 ~ 18703924 (-) | True | idh3g |
| XM_034311652.1 | mRNA | upstream | 329159 | 18936577 ~ 19064473 (-) | False | lrp1ab |
| XM_034311653.1 | mRNA | upstream | 329159 | 18936577 ~ 19064473 (-) | True | lrp1ab |
| XM_026920189.2 | mRNA | upstream | 511613 | 19119031 ~ 19127613 (-) | False | si:dkey-21c19.3 |
| TU304189 | other | downstream | 52267 | 18509155 ~ 18513257 (-) | False | LOC113530839 |
| XR_004579746.1 | other | downstream | 264837 | 18285486 ~ 18300687 (-) | False | znf217 |
| TU303855 | other | downstream | 652247 | 17893081 ~ 17913277 (-) | False | kcng1 |
| XR_004579680.1 | other | downstream | 869926 | 17676565 ~ 17695598 (-) | True | LOC117599224 |
| XR_004579669.1 | other | downstream | 1734265 | 16813384 ~ 16831259 (-) | False | si:ch211-210c8.6 |
| XR_004579689.1 | other | upstream | 330492 | 18937910 ~ 19064582 (-) | False | lrp1ab |
| trnak-uuu_17 | other | upstream | 521046 | 19128464 ~ 19128536 (-) | True | trnak-uuu_17 |
| XR_004579690.1 | other | upstream | 763269 | 19370687 ~ 19387041 (-) | False | LOC113530570 |
| TU305224 | other | upstream | 1008109 | 19615527 ~ 19621560 (-) | False | magi3a |
| XR_003403201.2 | other | upstream | 1493581 | 20100999 ~ 20109210 (-) | True | kansl2 |
