Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034312176.1 |
| length | 1069 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 7 |
| gene id | eif4e3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 14520259 ~ 14528718 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006413 | translational initiation | biological_process |
| GO:0006417 | regulation of translation | biological_process |
| GO:0005845 | mRNA cap binding complex | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003743 | translation initiation factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU301817 | lncRNA | upstream | 42550 | 14443189 ~ 14477709 (+) | True | G254967 |
| TU301818 | lncRNA | upstream | 42550 | 14472671 ~ 14477709 (+) | False | G254967 |
| TU301465 | lncRNA | upstream | 451796 | 14068259 ~ 14068463 (+) | True | G254653 |
| TU301453 | lncRNA | upstream | 464297 | 14055216 ~ 14055962 (+) | True | G254644 |
| TU301436 | lncRNA | upstream | 487926 | 14032116 ~ 14032333 (+) | True | G254633 |
| TU301815 | lncRNA | downstream | 78361 | 14607079 ~ 14615274 (+) | True | G254966 |
| TU301850 | lncRNA | downstream | 93599 | 14622317 ~ 14673952 (+) | False | G254991 |
| TU301852 | lncRNA | downstream | 141086 | 14669804 ~ 14673952 (+) | True | G254991 |
| TU301853 | lncRNA | downstream | 141086 | 14669804 ~ 14673952 (+) | False | G254991 |
| TU301928 | lncRNA | downstream | 176550 | 14705268 ~ 14705536 (+) | True | G255057 |
| XM_026921303.2 | mRNA | upstream | 11829 | 14491176 ~ 14508430 (+) | False | rybpa |
| XM_034312159.1 | mRNA | upstream | 11829 | 14491325 ~ 14508430 (+) | True | rybpa |
| XM_026921298.2 | mRNA | upstream | 79922 | 14364413 ~ 14440337 (+) | True | cntn3a.2 |
| XM_026921299.2 | mRNA | upstream | 79922 | 14364917 ~ 14440337 (+) | False | cntn3a.2 |
| XM_026920996.2 | mRNA | upstream | 256078 | 14204849 ~ 14264181 (+) | False | si:dkey-178k16.1 |
| XM_034311901.1 | mRNA | downstream | 2117 | 14530835 ~ 14574310 (+) | True | foxp1a |
| XM_026921208.2 | mRNA | downstream | 2118 | 14530836 ~ 14574310 (+) | False | foxp1a |
| XM_026921210.2 | mRNA | downstream | 2118 | 14530836 ~ 14574310 (+) | False | foxp1a |
| XM_034311903.1 | mRNA | downstream | 2493 | 14531211 ~ 14574310 (+) | False | foxp1a |
| XM_034311902.1 | mRNA | downstream | 2654 | 14531372 ~ 14574310 (+) | False | foxp1a |
| TU301462 | other | upstream | 448043 | 14070269 ~ 14072216 (+) | True | wfdc2 |
| TU301463 | other | upstream | 448043 | 14070269 ~ 14072216 (+) | False | wfdc2 |
| XR_004579688.1 | other | upstream | 448101 | 14070228 ~ 14072158 (+) | False | wfdc2 |
| XR_003403145.2 | other | upstream | 1669264 | 12837051 ~ 12850995 (+) | False | rbbp8l |
| XR_004579730.1 | other | upstream | 2135685 | 12366743 ~ 12384574 (+) | False | LOC113530266 |
| TU301848 | other | downstream | 141086 | 14669804 ~ 14673952 (+) | False | G254991 |
| TU301849 | other | downstream | 141086 | 14669804 ~ 14673952 (+) | False | G254991 |
| TU302131 | other | downstream | 588394 | 15117112 ~ 15120212 (+) | True | rps21 |
| TU302132 | other | downstream | 588394 | 15117112 ~ 15167668 (+) | False | rps21 |
| XR_004579698.1 | other | downstream | 1681932 | 16210650 ~ 16229406 (+) | False | LOC113530889 |
